Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RPL9P6-201ENST00000492764 598 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 MRPS17P9-201ENST00000511924 393 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 RNU7-193P-201ENST00000516723 65 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 HMGN1P28-201ENST00000521340 364 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AL049838.1-201ENST00000563647 981 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC005261.5-201ENST00000596280 355 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC004805.2-201ENST00000605382 482 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC239868.4-201ENST00000608318 671 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC009237.15-201ENST00000610252 501 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AL627230.6-201ENST00000611129 280 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC107075.1-201ENST00000613695 314 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 TUG1_2.1-201ENST00000614234 87 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 AC009268.2-201ENST00000621925 457 ntBASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
HHLA3Q9XRX5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AL161781.1-201ENST00000354277 403 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 SNORA64-201ENST00000384674 134 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 CCNG1P1-201ENST00000406783 885 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 RN7SKP223-201ENST00000410582 62 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 RN7SKP192-201ENST00000411291 327 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC027124.2-201ENST00000428249 105 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 RPL30P4-201ENST00000429309 333 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC010153.1-201ENST00000432862 727 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 USP9YP8-201ENST00000441913 500 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 HMGN1P5-201ENST00000448591 263 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 ANXA2P1-201ENST00000505539 926 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC008549.1-201ENST00000512900 643 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 RNA5SP290-201ENST00000517133 127 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 RNU6-1028P-201ENST00000517164 93 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 MTCO2P15-201ENST00000532655 656 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC007151.1-201ENST00000572774 483 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC126365.2-201ENST00000580630 379 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC008507.2-201ENST00000588402 1176 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC078899.2-201ENST00000595282 212 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 RPP40P2-201ENST00000603596 712 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AP002802.2-201ENST00000605877 235 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AL136981.2-201ENST00000617319 734 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AL158163.2-201ENST00000619110 700 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AC099063.3-201ENST00000642066 185 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 AL079343.1-201ENST00000572358 1771 ntBASIC1.44□□□□□ -2.18
HHLA3Q9XRX5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 SNORA63.3-201ENST00000362682 132 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 U8.2-201ENST00000363156 134 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 SNORA67.3-201ENST00000384366 140 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 RNU6-253P-201ENST00000384730 105 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 AL590084.2-201ENST00000401481 382 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 ELOCP14-201ENST00000428070 331 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 ZYG11AP1-201ENST00000430329 837 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 MTND1P28-201ENST00000435623 950 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 ELOCP7-201ENST00000439968 331 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 MTATP6P30-201ENST00000443540 664 ntBASIC1.43□□□□□ -2.18
HHLA3Q9XRX5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms