Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 RNU6-379P-201ENST00000363813 104 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 RNU6-1127P-201ENST00000384580 107 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 NDUFS5P1-201ENST00000405668 289 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 BX682237.1-201ENST00000415016 335 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AL590632.1-201ENST00000424289 371 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC128713.1-201ENST00000471495 306 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC110794.1-201ENST00000505816 425 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC108078.2-201ENST00000510750 236 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC016065.2-201ENST00000514530 444 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 RNU6-388P-201ENST00000517012 105 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 RNU6-389P-201ENST00000517048 105 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 RNU6-699P-201ENST00000517081 110 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC087854.1-201ENST00000519706 414 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC025946.2-201ENST00000603398 234 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AL591034.3-201ENST00000605511 685 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC009229.3-201ENST00000608056 282 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 AC010378.1-201ENST00000619270 362 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 PLCE1P1-201ENST00000622094 305 ntBASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PACSIN3Q9UKS6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AL592437.2-201ENST00000421655 2434 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 SAGE4P-201ENST00000442271 3381 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 Y_RNA.126-201ENST00000363382 111 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 Y_RNA.455-201ENST00000384230 98 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 Y_RNA.512-201ENST00000384518 102 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 RNU2-47P-201ENST00000410649 186 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 RNU4-46P-201ENST00000410818 138 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 ATG3P1-201ENST00000419507 911 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC005094.1-201ENST00000440420 368 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 DYNLL1P5-201ENST00000467158 270 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC135721.1-201ENST00000497954 479 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 RPS27AP13-201ENST00000498403 237 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 HIGD1AP13-201ENST00000509878 289 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC107222.1-201ENST00000510899 637 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC026782.1-201ENST00000512952 449 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 Y_RNA.670-201ENST00000516255 105 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC025627.2-201ENST00000576220 160 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC113195.1-201ENST00000579952 141 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 VN1R85P-201ENST00000601587 426 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 HMGB1P24-202ENST00000615653 685 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC091925.2-201ENST00000625059 256 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 ZNF33CP-201ENST00000432492 2030 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 AC022893.2-201ENST00000564832 3296 ntBASIC3.8□□□□□ -1.8
PACSIN3Q9UKS6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 AC011978.2-201ENST00000569835 2054 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 RNU6-562P-201ENST00000362731 107 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 RNU6-1026P-201ENST00000384465 108 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 U3.29-201ENST00000391296 212 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 AL391417.1-201ENST00000404100 426 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 AL445189.1-201ENST00000405722 338 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 HSPE1P8-201ENST00000406997 288 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 MIR1251-201ENST00000408552 70 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 RNA5SP317-201ENST00000410176 116 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 RNU6-1050P-201ENST00000410388 107 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 RN7SKP159-201ENST00000410657 292 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 RNA5SP311-201ENST00000411290 116 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 DPH3P2-201ENST00000422618 250 ntBASIC3.79□□□□□ -1.8
PACSIN3Q9UKS6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms