Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 MTCO3P9-201ENST00000506989 781 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 RNU6-352P-201ENST00000516908 107 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 ANP32BP3-201ENST00000559213 706 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 MIR5187-201ENST00000583479 76 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 RNU1-30P-201ENST00000606575 163 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 AL390240.1-201ENST00000612950 384 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 AC005344.1-201ENST00000613391 459 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 AC130324.3-201ENST00000614165 542 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 AC090132.2-201ENST00000615881 347 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 FP236240.3-201ENST00000623061 327 ntBASIC4.15□□□□□ -1.75
USP25Q9UHP3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP25Q9UHP3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.15□□□□□ -1.75
USP25Q9UHP3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP25Q9UHP3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP25Q9UHP3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 SNORA48.7-201ENST00000391302 135 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 AL445189.1-201ENST00000405722 338 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 AL162578.1-201ENST00000406202 378 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 RNU6-193P-201ENST00000410977 107 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 BX842559.1-201ENST00000419615 532 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP25Q9UHP3 OR2AS1P-201ENST00000427827 319 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 SNORD97-201ENST00000459187 142 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 RNU6-579P-201ENST00000516879 102 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 AP006245.1-201ENST00000522549 120 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 AC243972.3-201ENST00000539655 198 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 AC037471.2-201ENST00000564941 598 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 AL121992.2-201ENST00000606262 256 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP25Q9UHP3 AL354798.1-201ENST00000622505 329 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.14□□□□□ -1.75
USP25Q9UHP3 AC034229.5-201ENST00000624258 185 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 AC100810.6-201ENST00000638068 285 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 CUL1P1-201ENST00000509510 2425 ntBASIC4.14□□□□□ -1.75
USP25Q9UHP3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AP004289.2-201ENST00000444413 1457 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AL139276.1-201ENST00000311910 1001 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 NACAP2-201ENST00000318548 624 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 RNU1-75P-201ENST00000347264 129 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 MIR30E-201ENST00000362104 92 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 RNA5SP283-201ENST00000365604 119 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 MIR514A2-201ENST00000385131 88 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 MIR514A3-201ENST00000385132 88 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 snosnR66.1-201ENST00000391095 99 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 RNU6-1197P-201ENST00000391183 107 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AL513331.1-201ENST00000411908 397 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 EEF1A1P40-201ENST00000412883 573 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC009161.1-201ENST00000417306 376 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AL451054.2-201ENST00000420896 202 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 TMEM167AP1-201ENST00000423409 219 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AL365400.1-201ENST00000431854 640 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 MTATP6P16-201ENST00000434543 526 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 SNRPEP4-201ENST00000435815 279 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC009237.8-201ENST00000445492 379 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 RPL7P12-201ENST00000446719 750 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC020550.1-201ENST00000447385 163 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 GAPDHP27-201ENST00000447427 1020 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 HMGN2P26-201ENST00000463169 339 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC126389.1-201ENST00000477436 290 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 RPL21P129-201ENST00000491732 478 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 Y_RNA.675-201ENST00000516389 149 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 RNU7-51P-201ENST00000516560 62 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC023050.3-201ENST00000541142 333 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC008011.1-201ENST00000545989 227 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 MIR3186-201ENST00000577404 85 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC053481.4-201ENST00000583164 216 ntBASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms