Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 SNORA73.1-201ENST00000363107 205 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 SNORD82-201ENST00000365530 70 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 RNU6-1275P-201ENST00000391087 107 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC013442.1-201ENST00000397347 228 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 RNY4P29-201ENST00000410801 97 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 RPL7AP73-201ENST00000413490 353 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC112498.1-201ENST00000444401 332 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC074290.1-201ENST00000448883 135 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 RBMY2TP-201ENST00000451162 947 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC079354.2-201ENST00000453523 154 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC234775.1-201ENST00000454247 670 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC010631.1-201ENST00000474150 156 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 Y_RNA.706-201ENST00000516933 99 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 FTH1P11-201ENST00000517577 551 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC008033.2-201ENST00000542626 177 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 MTND5P34-201ENST00000568888 325 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 MIR5692A1-201ENST00000580523 69 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC008749.1-201ENST00000597650 306 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC123912.5-201ENST00000605470 343 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC099654.2-201ENST00000433031 1980 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 AC245100.2-201ENST00000454544 1679 ntBASIC5.31□□□□□ -1.56
NXF1Q9UBU9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 THAP12P5-201ENST00000405864 2275 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 Y_RNA.217-201ENST00000364214 105 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 U3.35-201ENST00000408405 208 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 RNU5A-5P-201ENST00000411054 116 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 CYCSP33-201ENST00000414485 327 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 RPS26P56-201ENST00000444468 240 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 MRPS10P1-201ENST00000448483 130 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 Y_RNA.641-201ENST00000459414 105 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 RPS17P2-201ENST00000461663 408 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 RN7SL481P-201ENST00000477764 299 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 AP003327.1-201ENST00000529684 127 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 LRRC37A5P-203ENST00000580181 585 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 snoZ196.1-201ENST00000625269 89 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 MIR3658-201ENST00000636291 56 ntBASIC5.3□□□□□ -1.56
NXF1Q9UBU9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NXF1Q9UBU9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NXF1Q9UBU9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NXF1Q9UBU9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NXF1Q9UBU9 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 RNU6-1226P-201ENST00000384317 107 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NXF1Q9UBU9 SNORA12.1-201ENST00000390873 148 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 SNORA26.2-201ENST00000390922 122 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 AC245028.1-201ENST00000423259 256 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 AL138785.1-201ENST00000425821 331 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 RPL23AP33-201ENST00000442301 452 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 AL360271.2-201ENST00000447710 161 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 AL356981.1-201ENST00000454879 684 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 AC008481.1-201ENST00000463278 396 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.29□□□□□ -1.56
NXF1Q9UBU9 RN7SL738P-201ENST00000470264 297 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 AC010683.1-201ENST00000473673 378 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 RN7SL346P-201ENST00000491561 294 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 RN7SKP179-201ENST00000516126 217 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 RNU6-612P-201ENST00000516909 102 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 RNU6-677P-201ENST00000516914 101 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 ATP5F1P5-201ENST00000526403 760 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 AK6P2-201ENST00000549020 471 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 DNAJC19P2-201ENST00000593340 302 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 RPL23AP78-201ENST00000599928 470 ntBASIC5.29□□□□□ -1.56
NXF1Q9UBU9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms