Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 Y_RNA.255-201ENST00000364581 97 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 RNU6-395P-201ENST00000365662 106 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 RNU6-903P-201ENST00000391270 109 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 MTHFD2P2-201ENST00000407725 247 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 RPL26P27-201ENST00000414397 437 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 KCTD9P3-201ENST00000434597 1169 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 UBE2V1P8-201ENST00000437166 265 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 RNU6-703P-201ENST00000516946 107 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 RNU6-835P-201ENST00000516974 104 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC009902.1-201ENST00000519351 183 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC134698.4-201ENST00000523451 826 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 OR5AQ1P-201ENST00000527596 927 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 MIR5187-201ENST00000583479 76 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC007938.3-201ENST00000604965 623 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 AL670379.4-201ENST00000605279 254 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC128687.2-201ENST00000609657 566 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 AL354950.2-201ENST00000617939 290 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC024940.5-201ENST00000622889 474 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LRFN1Q9P244 MTND5P7-201ENST00000413558 1798 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 HSPA8P4-201ENST00000511877 1920 ntBASIC3.5□□□□□ -1.85
LRFN1Q9P244 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LRFN1Q9P244 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN1Q9P244 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN1Q9P244 Y_RNA.33-201ENST00000362591 102 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 RNU6-552P-201ENST00000362869 119 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 RNU6-884P-201ENST00000363889 107 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 RNU6-116P-201ENST00000384042 109 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 RNA5SP111-201ENST00000411386 101 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC063979.1-201ENST00000415539 377 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 AL035423.1-201ENST00000420331 213 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 HMGN2P30-201ENST00000423237 256 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 SKA2P1-201ENST00000425592 390 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 USP9YP18-201ENST00000425912 695 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 MRPS10P2-201ENST00000431226 381 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 MYL8P-204ENST00000431574 518 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 NEK4P1-201ENST00000433383 879 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 BRK1P2-201ENST00000442875 223 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC008264.1-201ENST00000447612 367 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC003071.1-201ENST00000451219 789 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 AL031183.1-201ENST00000457667 207 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 RNU7-23P-201ENST00000459465 62 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC139453.3-201ENST00000493276 369 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC026801.1-201ENST00000497178 464 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 RNU6-718P-201ENST00000516166 105 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC026403.1-201ENST00000518938 295 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 AC090517.2-201ENST00000614966 680 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 U7.8-201ENST00000619968 63 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 SNORD39.4-201ENST00000620099 78 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN1Q9P244 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN1Q9P244 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN1Q9P244 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN1Q9P244 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 ELF2P3-201ENST00000445099 1506 ntBASIC3.49□□□□□ -1.85
LRFN1Q9P244 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.49□□□□□ -1.85
LRFN1Q9P244 RPS4XP5-202ENST00000449995 1334 ntBASIC3.48□□□□□ -1.85
LRFN1Q9P244 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRFN1Q9P244 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRFN1Q9P244 CKAP2P1-201ENST00000555477 2049 ntBASIC3.48□□□□□ -1.85
LRFN1Q9P244 UBE3AP2-201ENST00000429033 2259 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms