Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 U8.21-201ENST00000459536 136 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 MTND1P19-201ENST00000511780 315 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 AC109329.1-201ENST00000518744 317 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.94□□□□□ -1.62
CNTN3Q9P232 AP004371.1-201ENST00000525240 214 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.94□□□□□ -1.62
CNTN3Q9P232 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.94□□□□□ -1.62
CNTN3Q9P232 AC022968.1-201ENST00000567372 442 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 MIR5696-201ENST00000578474 85 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 MIR4284-201ENST00000578924 81 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 AL356218.2-201ENST00000605264 187 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 AC098479.1-201ENST00000609225 154 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 MIR1244-1-201ENST00000612829 85 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 MIR1244-3-201ENST00000635744 85 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CNTN3Q9P232 MIR1244-2-201ENST00000636449 85 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 MIR1244-4-202ENST00000636813 85 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNTN3Q9P232 AC139713.2-214ENST00000642059 1811 ntBASIC4.94□□□□□ -1.62
CNTN3Q9P232 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.94□□□□□ -1.62
CNTN3Q9P232 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNTN3Q9P232 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNTN3Q9P232 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
CNTN3Q9P232 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNTN3Q9P232 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTN3Q9P232 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 RNU6-1167P-201ENST00000363227 94 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 Y_RNA.117-201ENST00000363294 101 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 RNA5SP447-201ENST00000363749 119 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 RNU6-512P-201ENST00000364438 103 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 RNU6-335P-201ENST00000364563 113 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 Y_RNA.533-201ENST00000384596 114 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 RPL7AP25-201ENST00000423357 805 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 MTCO1P39-201ENST00000426148 480 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTN3Q9P232 RPL23AP93-201ENST00000440847 484 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 MTND4LP30-201ENST00000454092 297 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 RN7SL860P-201ENST00000473738 223 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 HMGN2P13-201ENST00000476476 274 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 AC002545.1-201ENST00000592511 181 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 AL158827.2-201ENST00000602494 330 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 AC123912.5-201ENST00000605470 343 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 AP005019.3-201ENST00000620418 560 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 MIR6810-201ENST00000622701 70 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 AL691447.3-201ENST00000635020 330 ntBASIC4.93□□□□□ -1.62
CNTN3Q9P232 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTN3Q9P232 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.93□□□□□ -1.62
CNTN3Q9P232 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTN3Q9P232 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTN3Q9P232 MIR412-201ENST00000362142 91 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 RNU1-83P-201ENST00000363426 164 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 Y_RNA.183-201ENST00000363882 113 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 RNU6-595P-201ENST00000363944 107 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 RNU6-173P-201ENST00000364215 104 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 RNU6-1317P-201ENST00000364582 104 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 U3.22-201ENST00000391120 215 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNTN3Q9P232 AL732292.1-201ENST00000426692 226 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC092423.1-201ENST00000430165 186 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 MTND2P29-201ENST00000438595 412 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AL590664.1-201ENST00000448065 339 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AL645939.1-201ENST00000453429 797 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC091144.1-201ENST00000519573 138 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC034114.1-201ENST00000520293 285 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AP003733.2-201ENST00000529409 171 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC098826.3-201ENST00000603823 466 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC004852.3-201ENST00000614131 326 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNTN3Q9P232 AC107068.1-201ENST00000563286 4218 ntBASIC4.92□□□□□ -1.62
CNTN3Q9P232 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTN3Q9P232 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.92□□□□□ -1.62
CNTN3Q9P232 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNTN3Q9P232 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 CPHL1P-201ENST00000461341 3407 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 Y_RNA.26-201ENST00000362539 101 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 RNU6-806P-201ENST00000365147 105 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms