Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 MIR483-201ENST00000385070 76 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 SNORA11.1-201ENST00000408133 129 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 RPL17P12-201ENST00000413391 526 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 RPL26P27-201ENST00000414397 437 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 MYL8P-204ENST00000431574 518 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC124916.1-201ENST00000444020 547 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC013267.1-201ENST00000458227 267 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC080013.2-201ENST00000460866 323 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC008481.1-201ENST00000463278 396 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 RNU6-927P-201ENST00000516199 100 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC021451.1-201ENST00000523498 1129 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AL133241.1-201ENST00000556832 487 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 CYCSP2-201ENST00000558168 301 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC021739.1-201ENST00000559631 174 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AL121652.1-201ENST00000608851 448 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AC010378.1-201ENST00000619270 362 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 AL356266.1-201ENST00000623311 483 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VAPAQ9P0L0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.9□□□□□ -2.1
VAPAQ9P0L0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 RNU6-525P-201ENST00000363685 104 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 RN7SKP158-201ENST00000410453 326 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 RNA5SP80-201ENST00000410475 111 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 RNU4-53P-201ENST00000410828 140 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 RNU2-68P-201ENST00000410878 191 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC003685.2-201ENST00000422795 395 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC093106.2-201ENST00000428212 385 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 RPL23AP83-201ENST00000434984 473 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 UBE2D3P1-201ENST00000436669 444 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 RPL23AP76-201ENST00000441860 458 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 MTATP6P30-201ENST00000443540 664 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 TPT1P14-201ENST00000448018 505 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 MEMO1P3-201ENST00000459811 302 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC079203.1-201ENST00000487972 404 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC113347.3-201ENST00000509113 148 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC093752.1-206ENST00000511823 336 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC110760.3-202ENST00000515177 371 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 LRRC6P1-201ENST00000532188 885 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC026464.5-201ENST00000562497 722 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC112220.2-201ENST00000605513 533 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AL162373.1-201ENST00000620433 407 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC079416.3-201ENST00000624479 549 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC126544.2-201ENST00000625174 749 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC011477.1-204ENST00000623416 1325 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 AC092447.10-201ENST00000620607 1652 ntBASIC1.9□□□□□ -2.11
VAPAQ9P0L0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 RNU6-1167P-201ENST00000363227 94 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 RNU1-148P-201ENST00000384472 162 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 NDUFB4P4-201ENST00000404822 243 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 CIR1P3-201ENST00000405137 479 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 RNA5SP270-201ENST00000411361 118 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 RPS3AP44-201ENST00000425466 790 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AL161651.1-201ENST00000440882 223 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC020550.1-201ENST00000447385 163 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 HMGN2P10-201ENST00000448085 265 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC024589.1-201ENST00000512207 263 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC008837.2-201ENST00000513076 418 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 SNORD19.2-201ENST00000516978 73 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC023538.1-201ENST00000534576 736 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC006199.1-201ENST00000548728 219 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 MTND3P13-201ENST00000574391 343 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms