Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC108078.1-201ENST00000508073 725 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 HMGN1P28-201ENST00000521340 364 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 MED28P6-201ENST00000558776 231 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC010546.1-201ENST00000569391 485 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 MIR3670-2-201ENST00000582974 65 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 MIR3670-1-201ENST00000584160 65 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 MIR3670-3-201ENST00000584855 65 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC025165.5-201ENST00000602802 578 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AL161756.2-201ENST00000604597 246 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC008277.2-201ENST00000605196 797 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 MIR3670-4-201ENST00000612260 65 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AL110115.1-201ENST00000614396 364 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AL158209.2-201ENST00000619266 216 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC136475.10-201ENST00000620253 385 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AC039056.2-201ENST00000622261 511 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 OR5H6-203ENST00000642105 978 ntBASIC2.82□□□□□ -1.96
NDE1Q9NXR1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
NDE1Q9NXR1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RNU6-181P-201ENST00000363225 107 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RNA5SP50-201ENST00000363731 107 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RNU6-169P-201ENST00000365336 107 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 GSTA9P-201ENST00000406231 611 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 PIGFP2-201ENST00000421400 651 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 MTCO2P11-201ENST00000431069 680 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 FCF1P1-201ENST00000432690 571 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 MTCO3P45-201ENST00000443036 613 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 MTATP6P30-201ENST00000443540 664 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RPS3AP12-201ENST00000443616 753 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 Z96811.1-201ENST00000445880 108 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 SNRPGP6-201ENST00000451124 220 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 PRSS3P4-201ENST00000453323 162 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RPS3AP14-201ENST00000483907 780 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 VN1R104P-201ENST00000505115 1009 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RNU6-390P-201ENST00000516259 103 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 SCARNA24.1-201ENST00000516465 137 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RNU6-445P-201ENST00000516949 107 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 RNU6-840P-201ENST00000517275 65 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 ERHP1-201ENST00000523006 310 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AC087883.1-201ENST00000551882 391 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 NCAPGP2-201ENST00000557911 754 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AC012182.1-201ENST00000570133 895 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 SRGNP1-201ENST00000603392 451 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AL160281.1-201ENST00000605307 311 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AC008962.1-201ENST00000605729 304 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AL355810.1-201ENST00000614629 552 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AC091953.5-201ENST00000622919 233 ntBASIC2.81□□□□□ -1.96
NDE1Q9NXR1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
NDE1Q9NXR1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 SNORD56.2-201ENST00000363242 71 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 RNU6-511P-201ENST00000363496 107 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 SNORA9.2-201ENST00000365361 133 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 RNU6-517P-201ENST00000384362 110 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AL136372.1-201ENST00000403060 228 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 RNU2-62P-201ENST00000410868 191 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AL096701.2-201ENST00000416920 238 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.8□□□□□ -1.96
NDE1Q9NXR1 MTND1P4-201ENST00000435196 415 ntBASIC2.8□□□□□ -1.96
NDE1Q9NXR1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms