Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GMPSP1-201ENST00000514075 579 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 SNORA72.7-201ENST00000516349 94 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 MIR892C-201ENST00000516410 77 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 MIR4308-201ENST00000580634 81 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AL359881.1-201ENST00000602916 267 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AL360181.4-201ENST00000621752 134 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-600P-201ENST00000362524 99 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 Y_RNA.215-201ENST00000364204 112 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 MIR607-201ENST00000385241 96 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 RNA5SP487-201ENST00000410186 122 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 RNU5E-9P-201ENST00000411164 104 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 TMSB10P2-201ENST00000416049 131 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC006463.2-201ENST00000473326 348 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 RPS15AP34-201ENST00000487776 387 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC023424.1-201ENST00000496058 459 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC005921.1-201ENST00000510589 286 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-513P-201ENST00000516104 104 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 Y_RNA.719-201ENST00000517156 106 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 RNA5SP373-201ENST00000517271 95 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC008489.1-201ENST00000524271 483 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AP004242.1-201ENST00000533701 349 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 OR4H12P-201ENST00000556269 907 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC105254.2-201ENST00000603636 436 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC008785.1-201ENST00000624475 456 ntBASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CUEDC1Q9NWM3 AC007390.2-201ENST00000606229 3803 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 AC139769.1-204ENST00000472297 1931 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 Y_RNA.43-201ENST00000362670 111 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-1301P-201ENST00000362724 104 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-1179P-201ENST00000384667 107 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 RNU5A-5P-201ENST00000411054 116 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 PPP1R11P2-201ENST00000423543 382 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 TOMM20P4-201ENST00000427861 435 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 AC005002.2-201ENST00000438228 269 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 HMGB1P22-201ENST00000505315 124 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 MIR4436B2-201ENST00000581415 91 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 MIR4697-201ENST00000582977 78 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 MIR4436B1-201ENST00000583272 91 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 MIR7853-201ENST00000584820 132 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 LINC00901.1-201ENST00000617252 152 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 AP002799.1-201ENST00000623552 423 ntBASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CUEDC1Q9NWM3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 U3.2-201ENST00000362981 210 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-76P-201ENST00000384060 104 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 MIR141-201ENST00000384975 95 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 MIR105-1-201ENST00000385222 81 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 GPS2P1-201ENST00000411761 986 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 RPL21P40-201ENST00000428586 483 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms