Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AC147055.4-201ENST00000504399 745 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AC079140.2-201ENST00000506193 142 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AP003973.1-201ENST00000604639 691 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AC123912.5-201ENST00000605470 343 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 AL121890.5-201ENST00000620848 304 ntBASIC0.56□□□□□ -2.32
SMCO4Q9NRQ5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 SNORA81-201ENST00000408493 178 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AC009518.2-201ENST00000418056 731 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 CENPUP1-201ENST00000526649 1202 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 MTCYBP27-201ENST00000555160 670 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AC087465.1-201ENST00000560574 245 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AC093510.2-201ENST00000562820 896 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AL356432.3-201ENST00000568952 465 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 MIR4504-201ENST00000577413 92 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AC005229.3-201ENST00000603438 323 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 AC116312.1-201ENST00000606841 314 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 SCARNA15.3-201ENST00000626315 122 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 SCARNA4.1-201ENST00000628597 123 ntBASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.55□□□□□ -2.32
SMCO4Q9NRQ5 RNA5SP327-201ENST00000362494 101 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 RNU1-22P-201ENST00000363334 158 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 RNU6-26P-201ENST00000383985 107 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 MIR518D-201ENST00000385014 87 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 RNU2-36P-201ENST00000410361 191 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 CST2P1-201ENST00000425770 87 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 AL135790.2-201ENST00000437701 267 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 AC111000.5-201ENST00000506559 1178 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 RNU6-1004P-201ENST00000516584 111 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 RNU6-548P-201ENST00000517083 115 ntBASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC0.54□□□□□ -2.32
SMCO4Q9NRQ5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 RNU6-1251P-201ENST00000364502 107 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 SNORA29-201ENST00000384183 140 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 RNU6-185P-201ENST00000384421 107 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 MIR532-201ENST00000385025 91 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC004965.1-201ENST00000413033 213 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 TRIM60P13-201ENST00000432350 1283 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 DNAJC19P8-201ENST00000452887 259 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 BX322784.1-201ENST00000455793 1077 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC112492.4-201ENST00000456549 352 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 ACA64.5-201ENST00000516207 127 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 RNU6-798P-201ENST00000516912 103 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 RN7SKP96-201ENST00000516948 297 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC021171.1-201ENST00000603137 706 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 U6.48-201ENST00000618523 106 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 AC091895.1-201ENST00000624494 256 ntBASIC0.53□□□□□ -2.32
SMCO4Q9NRQ5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 SNORD65-201ENST00000391079 73 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 PRRC2CP1-201ENST00000404428 159 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 U6atac.2-201ENST00000408644 118 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 RNU2-64P-201ENST00000411315 191 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 RSU1P2-202ENST00000437884 485 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 MRPL35P4-201ENST00000453682 566 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 PSMC1P5-201ENST00000512850 177 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 AC005832.3-201ENST00000537929 631 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 MIR4661-201ENST00000582720 75 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 AL138963.2-201ENST00000605137 226 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 MIR6857-201ENST00000613267 93 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 AL133370.2-201ENST00000619934 439 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 OR5H6-203ENST00000642105 978 ntBASIC0.52□□□□□ -2.33
SMCO4Q9NRQ5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms