Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SNORD105B-201ENST00000458770 79 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 RN7SL442P-201ENST00000473804 320 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC092989.1-201ENST00000481235 277 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC117522.3-201ENST00000507974 584 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 SNORA70.18-201ENST00000516696 98 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 RN7SKP219-201ENST00000516825 296 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 RNU6-685P-201ENST00000517088 95 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 RNA5SP290-201ENST00000517133 127 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC026403.1-201ENST00000518938 295 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AP005435.4-201ENST00000529514 284 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 RANP3-201ENST00000530970 276 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 OR5B10P-201ENST00000532869 642 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 MIR4703-201ENST00000577728 79 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 MIR4429-201ENST00000580105 73 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AL162413.1-201ENST00000603198 110 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 SNORA51-201ENST00000606420 132 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC007014.2-201ENST00000615581 479 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 uc_338.11-201ENST00000619132 160 ntBASIC3.13□□□□□ -1.91
HINT3Q9NQE9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HINT3Q9NQE9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC004972.1-201ENST00000623934 2209 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 RNU6-1287P-201ENST00000362914 107 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 Y_RNA.255-201ENST00000364581 97 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 Y_RNA.453-201ENST00000384223 109 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 RNU6-1060P-201ENST00000384664 107 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 CISD1P1-201ENST00000393907 327 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 RNU6-908P-201ENST00000410160 94 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC080125.1-201ENST00000414888 684 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC092047.1-201ENST00000424997 240 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 CALM2P2-201ENST00000428512 440 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AL592045.1-201ENST00000429867 352 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 RPL23AP69-201ENST00000431134 458 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC073415.1-201ENST00000449240 153 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 MTAPP1-201ENST00000489154 819 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC104619.4-201ENST00000510773 249 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC107934.2-201ENST00000518653 310 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AP001094.1-201ENST00000579805 193 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 BNIP3P30-201ENST00000601184 574 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 BNIP3P9-201ENST00000603714 553 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 U4.6-201ENST00000621618 127 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 AC092628.2-201ENST00000622492 339 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 CKAP2P1-201ENST00000555477 2049 ntBASIC3.12□□□□□ -1.91
HINT3Q9NQE9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.12□□□□□ -1.91
HINT3Q9NQE9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.11□□□□□ -1.91
HINT3Q9NQE9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.11□□□□□ -1.91
HINT3Q9NQE9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
HINT3Q9NQE9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HINT3Q9NQE9 AC007496.3-201ENST00000624987 3443 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 AC118273.1-201ENST00000525324 3006 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 AL139276.1-201ENST00000311910 1001 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 SNORD9-201ENST00000362566 104 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 Y_RNA.248-201ENST00000364501 109 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 SNORA73.2-201ENST00000364946 201 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 Y_RNA.534-201ENST00000384599 112 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 MIR449B-201ENST00000384995 97 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 MIR670-201ENST00000390142 98 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 RNU6-903P-201ENST00000391270 109 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 RPS4XP3-201ENST00000398541 413 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 MIR1277-201ENST00000408536 78 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 RNU2-29P-201ENST00000410423 189 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.11□□□□□ -1.91
HINT3Q9NQE9 OR6C66P-201ENST00000414917 930 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 AC093578.1-201ENST00000415219 368 ntBASIC3.11□□□□□ -1.91
HINT3Q9NQE9 MTCYBP5-201ENST00000423752 1135 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms