Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 SUB1P3-201ENST00000564581 315 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AC125232.2-201ENST00000592457 143 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 MTND4LP5-201ENST00000605152 292 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 HMGB1P50-201ENST00000605814 607 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AL365434.2-201ENST00000607979 234 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 MIR378J-201ENST00000611988 109 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 AC015967.1-201ENST00000619893 476 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 MIR7641-1-201ENST00000627518 61 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 MAPK10-304ENST00000641341 3984 ntBASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SEC61A2Q9H9S3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 MTND5P7-201ENST00000413558 1798 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 OR56B2P-202ENST00000641377 2453 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RNA5SP307-201ENST00000362863 116 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RNA5SP443-201ENST00000363083 132 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RNA5SP447-201ENST00000363749 119 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RNA5SP513-201ENST00000364648 118 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-472P-201ENST00000384299 107 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 MIR578-201ENST00000384828 96 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 MIR1252-201ENST00000408861 65 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RPL12P46-201ENST00000436610 195 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AC008264.1-201ENST00000447612 367 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL451050.1-201ENST00000450126 415 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RPL37P6-201ENST00000460682 294 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.715-201ENST00000517082 110 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 IGHV3-76-201ENST00000522465 295 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AC005951.2-201ENST00000576282 495 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 MIR5188-201ENST00000583467 113 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL512605.2-201ENST00000592972 256 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL023881.1-201ENST00000621088 301 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL031601.2-202ENST00000622650 282 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 MIR4272-201ENST00000635924 64 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 AL450326.2-201ENST00000421913 1962 ntBASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
SEC61A2Q9H9S3 ZNF285B-201ENST00000561698 1767 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 SNORD74.4-201ENST00000364129 80 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 Y_RNA.552-201ENST00000384665 112 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 MT-TW-201ENST00000387382 68 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 MIR708-201ENST00000390708 88 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AL445529.1-201ENST00000398713 389 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 RPL21P1-201ENST00000399532 476 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 RNU6-1156P-201ENST00000410365 100 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 TMSB10P2-201ENST00000416049 131 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AC006946.1-201ENST00000429106 328 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AL133396.1-201ENST00000432048 687 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AC073063.1-201ENST00000434352 607 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 RPL23AP31-201ENST00000456160 467 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 RNU7-169P-201ENST00000459456 61 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AC011005.2-201ENST00000487324 359 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 RPL17P19-201ENST00000489069 552 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 RNU2-53P-201ENST00000516257 147 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 RN7SKP258-201ENST00000517151 304 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AC040926.1-201ENST00000530195 238 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 MIR5692A1-201ENST00000580523 69 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AC093227.2-201ENST00000589357 285 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 Z98751.3-201ENST00000604447 521 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AC010201.1-201ENST00000605051 540 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 SNORD39.4-201ENST00000620099 78 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 MIR6758-201ENST00000620653 63 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms