Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 UBL5P3-201ENST00000475112 231 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC106872.3-201ENST00000495104 446 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC022447.3-201ENST00000506865 495 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 NRON-201ENST00000517270 370 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 ELOCP31-201ENST00000540463 467 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 TRAV28-201ENST00000557548 323 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC013244.3-201ENST00000605614 388 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC093838.1-201ENST00000613014 469 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC010133.1-201ENST00000615809 842 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 MIR7843-201ENST00000622274 79 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AC092125.1-201ENST00000562568 1995 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AL137003.2-201ENST00000606924 2538 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 SNORA68.1-201ENST00000364537 132 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 RNU6-1200P-201ENST00000384162 107 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AL162578.1-201ENST00000406202 378 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MIR1305-201ENST00000408300 86 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 DPH3P2-201ENST00000422618 250 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 RPL36AP6-201ENST00000435770 321 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AC233279.1-201ENST00000455300 423 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 IGKV3-31-201ENST00000523109 329 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 GLYCAM1-201ENST00000546596 285 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MYL12BP1-201ENST00000569826 507 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MIR1273D-201ENST00000577266 86 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MIR3670-2-201ENST00000582974 65 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MIR3670-1-201ENST00000584160 65 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MIR3670-3-201ENST00000584855 65 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 BX664608.1-201ENST00000610519 487 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MIR3670-4-201ENST00000612260 65 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 AC012150.2-201ENST00000621300 544 ntBASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
RPAP3Q9H6T3 MTND5P6-201ENST00000422338 1798 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RNU6-223P-201ENST00000362830 107 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RNU1-91P-201ENST00000364746 163 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RNU6-443P-201ENST00000384780 107 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RPS24P7-201ENST00000416921 246 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RPL22P18-201ENST00000417197 377 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 MTND2P9-201ENST00000422293 931 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AL022400.1-201ENST00000423946 935 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 HMGB3P12-201ENST00000438745 556 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 MTATP6P30-201ENST00000443540 664 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 BMI1P1-201ENST00000445879 941 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 WASF1P1-201ENST00000447560 1131 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 ST13P20-201ENST00000447996 1065 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RNU7-23P-201ENST00000459465 62 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AC133134.1-201ENST00000466800 359 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 RPL23AP49-201ENST00000492925 468 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 LTV1P1-201ENST00000510683 1237 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AL354943.1-201ENST00000572103 781 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AC025588.2-201ENST00000604851 466 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 TUSC7.1-201ENST00000610969 165 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AP000676.3-201ENST00000623299 569 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 AC073308.1-201ENST00000623696 305 ntBASIC2.74□□□□□ -1.97
RPAP3Q9H6T3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms