Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR6868-201ENST00000611215 58 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC006026.1-201ENST00000444025 1803 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.460-201ENST00000384255 102 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 MIR325-201ENST00000385260 98 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 RNA5SP39-201ENST00000411245 120 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 MTND1P14-201ENST00000427400 950 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AC236972.2-201ENST00000434979 310 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 TBCAP1-201ENST00000436520 327 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 RPL7P43-201ENST00000478876 753 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AC006517.1-201ENST00000480485 328 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 RPL29P14-201ENST00000495837 428 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 RNU6-277P-201ENST00000516272 106 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 RNU6-1069P-201ENST00000516612 133 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 RNU6-1088P-201ENST00000516850 104 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 MIR4790-201ENST00000577799 79 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 RN7SL703P-201ENST00000578485 302 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 MIR3672-201ENST00000584290 82 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 MIR5692C1-201ENST00000585309 91 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 RMST_9.1-201ENST00000619945 193 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AL031601.2-202ENST00000622650 282 ntBASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC113Q9H0I3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 FAM35BP-202ENST00000497389 3337 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 LINC02471-203ENST00000641941 4752 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.387-201ENST00000383918 102 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 RNU6-1011P-201ENST00000384668 107 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 RNU4-6P-201ENST00000410804 122 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 Z82210.1-201ENST00000440037 231 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AL360271.2-201ENST00000447710 161 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 FABP5P15-201ENST00000453566 214 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC233279.1-201ENST00000455300 423 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 FTH1P2-201ENST00000466086 412 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC017037.1-201ENST00000508460 471 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC087854.1-201ENST00000519706 414 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 ZNF192P1-203ENST00000565888 810 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC138761.3-201ENST00000579993 334 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC073539.2-201ENST00000597113 165 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 AC002044.1-201ENST00000606707 158 ntBASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC113Q9H0I3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 RNU4-76P-201ENST00000364509 141 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 FAT1P1-201ENST00000406588 507 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 RNU2-68P-201ENST00000410878 191 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms