Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.78□□□□□ -2.12
TRIM4Q9C037 HMGB1P27-201ENST00000431429 603 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.78□□□□□ -2.12
TRIM4Q9C037 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 AL121594.1-201ENST00000475906 575 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC007182.2-201ENST00000489251 402 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC026801.1-201ENST00000497178 464 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 SCARNA15.2-201ENST00000516409 127 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 SNORA31.22-201ENST00000517204 135 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 SNORA31.25-201ENST00000517242 134 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.78□□□□□ -2.12
TRIM4Q9C037 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC087441.2-201ENST00000529141 262 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC010186.2-204ENST00000537668 439 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 DNAJC19P9-201ENST00000555084 351 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC067805.1-201ENST00000559344 470 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 WISP1-OT1-201ENST00000602893 642 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC080013.4-201ENST00000607624 649 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 DUXAP10-204ENST00000612052 616 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC008498.1-201ENST00000613012 531 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AC010678.1-201ENST00000614118 713 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 RMST_2.1-201ENST00000617263 136 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 MIR6130-201ENST00000619419 109 ntBASIC1.78□□□□□ -2.12
TRIM4Q9C037 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.78□□□□□ -2.12
TRIM4Q9C037 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
TRIM4Q9C037 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM4Q9C037 RNY1-201ENST00000364228 113 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 RNU6-217P-201ENST00000384164 104 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 HMGB1P17-201ENST00000403495 628 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC023141.4-201ENST00000412031 328 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC018630.2-202ENST00000422992 927 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 EIF4EP4-201ENST00000424916 578 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC092047.1-201ENST00000424997 240 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 OR10R1P-201ENST00000441524 1141 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC007000.2-201ENST00000442564 487 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AP1S2P1-201ENST00000457344 379 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 AL121769.1-201ENST00000469473 401 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC140059.1-201ENST00000489238 361 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM4Q9C037 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 LARP7P2-201ENST00000575306 125 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 AL035411.2-201ENST00000604022 421 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC106052.1-201ENST00000608029 497 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 MIR6504-201ENST00000613520 61 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 AC006213.5-201ENST00000619673 288 ntBASIC1.77□□□□□ -2.13
TRIM4Q9C037 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
TRIM4Q9C037 MFSD8-213ENST00000641134 1327 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 Y_RNA.191-201ENST00000363972 113 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 Y_RNA.327-201ENST00000365201 102 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 PTGES3P2-201ENST00000407942 482 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.76□□□□□ -2.13
TRIM4Q9C037 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.76□□□□□ -2.13
TRIM4Q9C037 HMGB1P9-201ENST00000429856 646 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 RPS15AP5-201ENST00000436276 388 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.76□□□□□ -2.13
TRIM4Q9C037 AC004383.1-201ENST00000438135 289 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 PIGFP3-201ENST00000441918 722 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 MTCO1P48-201ENST00000448024 1096 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 RPL32P14-201ENST00000463196 378 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 RPS29P11-201ENST00000496507 171 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.76□□□□□ -2.13
TRIM4Q9C037 AC022447.1-201ENST00000515358 464 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 MIR449C-201ENST00000516047 92 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 RNU6-885P-201ENST00000516607 104 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM4Q9C037 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.76□□□□□ -2.13
TRIM4Q9C037 AP003066.2-201ENST00000529375 555 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM4Q9C037 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM4Q9C037 AC093519.1-201ENST00000566109 298 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 MTND4LP5-201ENST00000605152 292 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.76□□□□□ -2.13
TRIM4Q9C037 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 AL391987.6-201ENST00000305671 199 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 RNA5SP125-201ENST00000364843 120 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 MIR147B-201ENST00000390185 80 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 AC244453.4-201ENST00000419150 388 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 AIMP1P2-201ENST00000425294 312 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 HMGB1P31-201ENST00000437242 427 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms