Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC140479.3-201ENST00000418944 1126 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AL590632.1-201ENST00000424289 371 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC007560.1-201ENST00000426912 237 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 FABP5P14-201ENST00000437273 393 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 ABCF2P2-201ENST00000450549 296 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 RPL12P25-201ENST00000455592 494 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 RNA5SP310-201ENST00000459084 116 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC130509.1-201ENST00000464158 433 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC011276.1-201ENST00000469688 323 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC026801.1-201ENST00000497178 464 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC017037.1-201ENST00000508460 471 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 RNU6-572P-201ENST00000516724 80 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 RNU6-1153P-201ENST00000516760 105 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 Y_RNA.701-201ENST00000516812 110 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC026371.1-201ENST00000551867 419 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 IMMP1LP2-201ENST00000552954 492 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC105129.1-201ENST00000560250 297 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC100830.2-201ENST00000581636 240 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC069061.3-201ENST00000582254 823 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC025946.2-201ENST00000603398 234 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AL133255.1-201ENST00000606374 441 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AC099654.10-201ENST00000640395 161 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 RNA5SP502-201ENST00000362694 119 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 RN7SKP227-201ENST00000364445 330 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 Y_RNA.259-201ENST00000364619 101 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 RPS20P14-201ENST00000412545 360 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC098614.2-201ENST00000426040 255 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AL627311.1-201ENST00000431514 115 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 BRK1P2-201ENST00000442875 223 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC007677.1-201ENST00000445757 515 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 DHFRP3-201ENST00000455595 559 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC010618.1-201ENST00000469924 477 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC109327.1-201ENST00000471666 403 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC084198.1-201ENST00000477747 402 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC084783.1-201ENST00000565846 910 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC019278.1-201ENST00000623516 479 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 AC011944.2-201ENST00000624440 683 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 MTND4LP32-201ENST00000636111 270 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 CUL1P1-201ENST00000509510 2425 ntBASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM55Q9BYV6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 RNU6-166P-201ENST00000384371 107 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 MIR1911-201ENST00000410783 80 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 RNU6-370P-201ENST00000411008 104 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 SAR1AP4-201ENST00000429225 591 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AL078601.1-201ENST00000444542 271 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC012671.1-201ENST00000451912 203 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC092436.3-201ENST00000511788 257 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC026402.1-201ENST00000513642 170 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 MIR3939-201ENST00000582614 106 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 OR1M4P-201ENST00000589199 287 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 AC123912.5-201ENST00000605470 343 ntBASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM55Q9BYV6 RAD17P1-201ENST00000418130 2042 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms