Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL591034.2-201ENST00000402839 359 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AL080315.1-201ENST00000406055 466 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RNU6-121P-201ENST00000410525 99 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC092447.6-201ENST00000414578 210 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 EIF4EP2-201ENST00000422816 654 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RPS26P47-201ENST00000427219 348 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC004866.2-201ENST00000438285 481 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RPEP5-201ENST00000441137 268 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC009220.1-201ENST00000451614 275 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC098869.1-201ENST00000481627 292 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 MTND3P25-201ENST00000509243 135 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC007016.1-201ENST00000512110 244 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RN7SKP277-201ENST00000516895 283 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC091144.1-201ENST00000519573 138 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 CPDP1-201ENST00000579660 283 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 MIR3976-201ENST00000606807 139 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 SNORD39.4-201ENST00000620099 78 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC132825.6-201ENST00000638861 357 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AL359893.1-201ENST00000447628 1580 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 DDX18P3-201ENST00000404856 2007 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 OR56B2P-202ENST00000641377 2453 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AL049555.1-201ENST00000562834 1933 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 RNU6-545P-201ENST00000362681 104 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.533-201ENST00000384596 114 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 MIR141-201ENST00000384975 95 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 SDHCP2-201ENST00000398565 501 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AL592291.1-201ENST00000403830 352 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AL603910.2-201ENST00000407268 136 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 MIR1250-201ENST00000408098 113 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 RNA5SP36-201ENST00000410197 133 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AC016712.1-201ENST00000431088 378 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AL445433.1-201ENST00000457507 257 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 SCARNA10-201ENST00000459255 330 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 PPIAP21-201ENST00000464473 501 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AC020890.1-201ENST00000491837 504 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AC113155.1-201ENST00000511141 769 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AC015795.1-201ENST00000513669 327 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.703-201ENST00000516846 111 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 RN7SKP258-201ENST00000517151 304 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 OR4H12P-201ENST00000556269 907 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 MIR4284-201ENST00000578924 81 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 MIR548AI-201ENST00000579940 88 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 MIR4715-201ENST00000584117 79 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 SNORD91B-202ENST00000608459 222 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 Z75746.1-201ENST00000440243 2080 ntBASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.82□□□□□ -1.8
SSBP3Q9BWW4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 ZNF299P-201ENST00000406845 1804 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AC125257.1-201ENST00000560400 2930 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms