Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SUMO2P5-201ENST00000506790 245 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC024589.1-201ENST00000512207 263 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 MTND5P13-201ENST00000513046 1079 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC112673.1-201ENST00000513168 575 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 SNORA31.6-201ENST00000516241 130 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 RNA5SP200-201ENST00000516360 103 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 MTCYBP20-201ENST00000524239 1129 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 BNIP3P26-201ENST00000600827 554 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC024060.1-201ENST00000607052 494 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 MTND5P30-201ENST00000452896 1731 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 CENPCP1-201ENST00000533085 2578 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AP006437.1-201ENST00000641440 3685 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 SNORA3A-201ENST00000364113 130 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RNU1-51P-201ENST00000365345 176 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RNU6-744P-201ENST00000365557 107 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RNU6-1316P-201ENST00000384242 108 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 SNORA48.3-201ENST00000391081 134 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AL591416.1-201ENST00000404015 867 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RNU2-40P-201ENST00000410833 196 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RN7SKP284-201ENST00000411002 343 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AL109913.1-201ENST00000421173 514 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 SKA2P1-201ENST00000425592 390 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AL139415.2-201ENST00000431968 163 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 GTF2IP3-201ENST00000433887 494 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RPS15AP28-201ENST00000435088 386 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 SNRPEP7-201ENST00000438350 220 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 MTCO3P45-201ENST00000443036 613 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 PSPHP1-201ENST00000450062 261 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 ANXA2P1-201ENST00000505539 926 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC093752.1-206ENST00000511823 336 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RNU1-41P-201ENST00000516161 162 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RNU6-927P-201ENST00000516199 100 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 RNU1-48P-201ENST00000516400 162 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 MTCO2P15-201ENST00000532655 656 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 CYCSP2-201ENST00000558168 301 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 MTND3P13-201ENST00000574391 343 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 MIR4765-201ENST00000585007 77 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC008121.1-201ENST00000603244 268 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC069294.1-201ENST00000608397 350 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC010678.1-201ENST00000614118 713 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AL158163.2-201ENST00000619110 700 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC123767.1-202ENST00000620407 817 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 MIR6873-201ENST00000622788 63 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC079416.3-201ENST00000624479 549 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 U2.21-201ENST00000637295 81 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 AC011477.1-204ENST00000623416 1325 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.55□□□□□ -2.16
UPK3BQ9BT76 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.55□□□□□ -2.16
UPK3BQ9BT76 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 ADAM3A-203ENST00000461344 2157 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 HSPE1P11-201ENST00000339579 310 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 OR56A5-201ENST00000340110 738 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 MIR21-201ENST00000362134 72 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 RNU6-778P-201ENST00000363269 103 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 RNU6-298P-201ENST00000390888 96 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 SNORD23.1-201ENST00000408212 104 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AL030996.1-201ENST00000411430 235 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 RPL17P12-201ENST00000413391 526 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 RPL26P27-201ENST00000414397 437 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 NPM1P11-201ENST00000417106 855 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 BX276092.3-201ENST00000424182 230 ntBASIC1.54□□□□□ -2.16
UPK3BQ9BT76 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3BQ9BT76 ATP5F1P1-201ENST00000433775 569 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms