Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 MTND4LP26-201ENST00000518144 282 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 AL157687.1-201ENST00000554853 619 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 HMGB1P14-201ENST00000557424 591 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 AC027807.1-201ENST00000559921 996 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 MIR4474-201ENST00000579189 78 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 MIR5187-201ENST00000583479 76 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 BNIP3P30-201ENST00000601184 574 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 AC004805.2-201ENST00000605382 482 ntBASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCGF1Q9BSM1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL139276.1-201ENST00000311910 1001 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 Y_RNA.9-201ENST00000362354 101 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RNU6-1287P-201ENST00000362914 107 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RNU6-1060P-201ENST00000384664 107 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RNA5SP424-201ENST00000390988 115 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RNU6-550P-201ENST00000391057 101 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL391417.1-201ENST00000404100 426 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 CIR1P3-201ENST00000405137 479 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 OR6C66P-201ENST00000414917 930 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL160275.3-201ENST00000423876 471 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RPL7P46-201ENST00000425129 740 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL591704.1-201ENST00000432574 275 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 SNRPEP9-201ENST00000436794 238 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 HMGB3P11-201ENST00000440127 604 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RPS29P31-201ENST00000446147 164 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 DPPA3P1-201ENST00000448050 469 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RPL12P25-201ENST00000455592 494 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC006483.1-201ENST00000487308 313 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RAC1P2-201ENST00000511164 579 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RNU6-718P-201ENST00000516166 105 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RNU6-835P-201ENST00000516974 104 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 RNA5SP165-201ENST00000517142 115 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AP003122.3-201ENST00000526316 255 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC084851.1-201ENST00000529105 249 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 OR5B10P-201ENST00000532869 642 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC011602.1-201ENST00000546484 331 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC008739.3-201ENST00000603262 127 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL670379.4-201ENST00000605279 254 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 FTX_3.1-201ENST00000610451 147 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL512643.1-201ENST00000635735 524 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 MFSD8-236ENST00000641509 4050 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 MAPK10-362ENST00000641864 4484 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 AL359693.1-201ENST00000614959 2407 ntBASIC3.07□□□□□ -1.92
PCGF1Q9BSM1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RNU6-552P-201ENST00000362869 119 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RNY4P14-201ENST00000363656 96 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 Y_RNA.255-201ENST00000364581 97 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 SNORA69-201ENST00000383895 132 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RNA5SP171-201ENST00000391071 115 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 SNORD115-47-201ENST00000391226 86 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RNU6-903P-201ENST00000391270 109 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 CALM2P2-201ENST00000428512 440 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 MTND5P27-201ENST00000428871 1720 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RPL36AP53-201ENST00000432891 316 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RNU6-261P-201ENST00000459506 102 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 RPS27P29-201ENST00000463110 252 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 AL163973.1-201ENST00000484753 577 ntBASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCGF1Q9BSM1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms