Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC008962.1-201ENST00000605729 304 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 AL390240.1-201ENST00000612950 384 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 XIST_intron.1-201ENST00000619444 68 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.38□□□□□ -1.87
NPAS1Q99742 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.38□□□□□ -1.87
NPAS1Q99742 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPAS1Q99742 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
NPAS1Q99742 AC090740.1-201ENST00000623193 2262 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.37□□□□□ -1.87
NPAS1Q99742 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS1Q99742 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NPAS1Q99742 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS1Q99742 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS1Q99742 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.37□□□□□ -1.87
NPAS1Q99742 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.37□□□□□ -1.87
NPAS1Q99742 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS1Q99742 SNORA4.3-201ENST00000365564 137 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS1Q99742 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC063979.1-201ENST00000415539 377 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS1Q99742 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.37□□□□□ -1.87
NPAS1Q99742 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS1Q99742 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS1Q99742 SNRPEP4-201ENST00000435815 279 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC018710.1-201ENST00000506509 158 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC098591.2-201ENST00000510152 315 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS1Q99742 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS1Q99742 RNU6-1038P-201ENST00000516516 104 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AF235103.2-201ENST00000525753 346 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AL137161.1-201ENST00000532231 390 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS1Q99742 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS1Q99742 MIR5692A1-201ENST00000580523 69 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.37□□□□□ -1.87
NPAS1Q99742 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS1Q99742 RMST_3.1-201ENST00000611651 109 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC093913.1-201ENST00000614178 329 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC002076.2-201ENST00000617362 122 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AL357559.1-201ENST00000622228 274 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 AC027309.3-201ENST00000623419 351 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS1Q99742 AC099654.14-201ENST00000638599 341 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 ZNF285B-201ENST00000561698 1767 ntBASIC3.37□□□□□ -1.87
NPAS1Q99742 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS1Q99742 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NPAS1Q99742 AL049641.1-201ENST00000441055 1948 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NPAS1Q99742 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 AC073073.2-201ENST00000609827 2578 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.36□□□□□ -1.87
NPAS1Q99742 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 RNA5SP51-201ENST00000364750 119 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 Y_RNA.373-201ENST00000365600 103 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NPAS1Q99742 RNU6-140P-201ENST00000384566 108 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 RNU6-332P-201ENST00000391193 108 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 RPS4XP3-201ENST00000398541 413 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 RN7SKP202-201ENST00000410439 330 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 RNU6-193P-201ENST00000410977 107 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.36□□□□□ -1.87
NPAS1Q99742 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.36□□□□□ -1.87
NPAS1Q99742 RPL31P12-201ENST00000422587 358 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 ZNF863P-201ENST00000426746 417 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
NPAS1Q99742 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 AL591704.1-201ENST00000432574 275 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.36□□□□□ -1.87
NPAS1Q99742 HMGB3P11-201ENST00000440127 604 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.36□□□□□ -1.87
NPAS1Q99742 RPL38P4-201ENST00000502376 214 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 AC098799.2-201ENST00000509466 868 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 RNA5SP165-201ENST00000517142 115 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.36□□□□□ -1.87
NPAS1Q99742 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.36□□□□□ -1.87
NPAS1Q99742 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.36□□□□□ -1.87
NPAS1Q99742 MIR5187-201ENST00000583479 76 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.36□□□□□ -1.87
NPAS1Q99742 BNIP3P10-201ENST00000605360 577 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 AC009570.1-201ENST00000609599 745 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 SNORD39.4-201ENST00000620099 78 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.36□□□□□ -1.87
NPAS1Q99742 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.36□□□□□ -1.87
NPAS1Q99742 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS1Q99742 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NPAS1Q99742 ZNF807-201ENST00000328088 1707 ntBASIC3.36□□□□□ -1.87
NPAS1Q99742 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.36□□□□□ -1.87
NPAS1Q99742 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS1Q99742 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS1Q99742 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NPAS1Q99742 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms