Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 SNORD114-15-201ENST00000364687 72 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 XKRYP1-201ENST00000423438 492 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 XKRYP2-201ENST00000432915 492 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.59□□□□□ -2.32
COL12A1Q99715 AC069277.2-201ENST00000454211 432 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
COL12A1Q99715 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
COL12A1Q99715 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
COL12A1Q99715 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
COL12A1Q99715 RNU6-970P-201ENST00000516312 107 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.59□□□□□ -2.32
COL12A1Q99715 FAM106CP-201ENST00000582212 507 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 LLPHP1-201ENST00000603571 367 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 CYP2C61P-201ENST00000604072 290 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.59□□□□□ -2.32
COL12A1Q99715 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.59□□□□□ -2.32
COL12A1Q99715 AL162373.1-201ENST00000620433 407 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.59□□□□□ -2.32
COL12A1Q99715 AC091812.1-201ENST00000432235 1948 ntBASIC0.59□□□□□ -2.32
COL12A1Q99715 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
COL12A1Q99715 RNY4P24-201ENST00000362735 96 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 RNU6-1180P-201ENST00000364935 107 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 AC096632.1-201ENST00000427395 310 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.58□□□□□ -2.32
COL12A1Q99715 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.58□□□□□ -2.32
COL12A1Q99715 OR5B19P-201ENST00000531766 928 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 NBEAP1-201ENST00000554452 979 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 SNRPGP15-201ENST00000600149 222 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.58□□□□□ -2.32
COL12A1Q99715 AC109809.1-201ENST00000619665 545 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.58□□□□□ -2.32
COL12A1Q99715 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.58□□□□□ -2.32
COL12A1Q99715 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.58□□□□□ -2.32
COL12A1Q99715 CYCSP26-201ENST00000534107 320 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 SYF2P1-201ENST00000550658 413 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.58□□□□□ -2.32
COL12A1Q99715 AL078605.1-201ENST00000603529 500 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 AC005332.10-201ENST00000612725 619 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.58□□□□□ -2.32
COL12A1Q99715 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.58□□□□□ -2.32
COL12A1Q99715 MTCO1P23-201ENST00000415223 1526 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 HAUS6P2-201ENST00000433254 2404 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
COL12A1Q99715 RNU2-71P-201ENST00000411395 189 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 ELOCP6-201ENST00000429066 328 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.58□□□□□ -2.32
COL12A1Q99715 MTND6P13-201ENST00000443510 523 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 SUMO2P2-201ENST00000456482 255 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 ELOCP12-201ENST00000458706 328 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 Y_RNA.654-201ENST00000497848 106 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.58□□□□□ -2.32
COL12A1Q99715 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.58□□□□□ -2.32
COL12A1Q99715 AC008083.4-201ENST00000615076 444 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 AC068831.7-201ENST00000616954 363 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
COL12A1Q99715 AP003122.6-201ENST00000623831 495 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 MIR6866-201ENST00000638146 69 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 CCT4P2-201ENST00000233836 1548 ntBASIC0.58□□□□□ -2.32
COL12A1Q99715 AC121333.1-201ENST00000567488 2709 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 CIR1P3-201ENST00000405137 479 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 RPL21P24-201ENST00000413752 448 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.57□□□□□ -2.32
COL12A1Q99715 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.57□□□□□ -2.32
COL12A1Q99715 RPL17P49-201ENST00000443728 411 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AC091435.1-201ENST00000505442 584 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 RNA5SP67-201ENST00000516422 131 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.57□□□□□ -2.32
COL12A1Q99715 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.57□□□□□ -2.32
COL12A1Q99715 AC010620.1-201ENST00000601088 1102 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AL139344.1-201ENST00000605228 195 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AL133507.1-201ENST00000605269 557 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AC087045.1-201ENST00000605856 382 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AC022079.2-201ENST00000619739 566 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 SNORA51.2-201ENST00000364595 132 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
COL12A1Q99715 Y_RNA.413-201ENST00000384007 102 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 SDAD1P3-201ENST00000427380 333 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.57□□□□□ -2.32
COL12A1Q99715 Y_RNA.754-201ENST00000476024 102 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
COL12A1Q99715 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.57□□□□□ -2.32
COL12A1Q99715 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.57□□□□□ -2.32
COL12A1Q99715 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.57□□□□□ -2.32
COL12A1Q99715 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.57□□□□□ -2.32
COL12A1Q99715 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.57□□□□□ -2.32
COL12A1Q99715 Y_RNA.790-201ENST00000614282 102 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 Y_RNA.782-201ENST00000614695 102 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 MIR6718-201ENST00000616153 80 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AC006249.1-201ENST00000621223 471 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 AC006001.4-201ENST00000622243 395 ntBASIC0.57□□□□□ -2.32
COL12A1Q99715 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
COL12A1Q99715 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
COL12A1Q99715 CISD1P1-201ENST00000393907 327 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AL591043.1-201ENST00000432461 424 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 PTENP1-201ENST00000447117 1215 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 CLIC4P1-201ENST00000453177 535 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AC098591.2-201ENST00000510152 315 ntBASIC0.56□□□□□ -2.32
COL12A1Q99715 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms