Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 U2.9-201ENST00000615427 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.11-201ENST00000616345 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.2-201ENST00000616535 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AC004825.2-201ENST00000616634 455 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.3-201ENST00000617785 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.19-201ENST00000618602 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 RNU2-1-201ENST00000618664 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.6-201ENST00000619225 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.5-201ENST00000619465 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 U2.10-201ENST00000620268 191 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 AP001005.3-201ENST00000622049 129 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 MAPK10-328ENST00000641553 4009 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 THAP12P5-201ENST00000405864 2275 ntBASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP3BQ96NU0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 Y_RNA.121-201ENST00000363309 113 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 U3.6-201ENST00000363622 211 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-263P-201ENST00000363811 107 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 RNU4-11P-201ENST00000365287 132 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 SNORA22-201ENST00000383907 134 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-837P-201ENST00000391056 108 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 MIR513C-201ENST00000401352 84 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 MYL6P5-201ENST00000412707 459 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 RPL21P40-201ENST00000428586 483 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AC006130.2-201ENST00000586202 326 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AC060780.2-201ENST00000589047 198 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AL356218.2-201ENST00000605264 187 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AC004852.3-201ENST00000614131 326 ntBASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP3BQ96NU0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AP004607.3-201ENST00000530354 3915 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AP001029.2-203ENST00000589795 4910 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 SMG1P6-201ENST00000532337 2930 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 SNORD46.1-201ENST00000364139 104 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 RNU6-926P-201ENST00000384075 107 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 SNORA70E-201ENST00000384492 135 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 RPL7AP73-201ENST00000413490 353 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AL096701.2-201ENST00000416920 238 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AC009237.7-201ENST00000447357 229 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 MRPS10P1-201ENST00000448483 130 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AC074290.1-201ENST00000448883 135 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AL162739.1-201ENST00000450606 307 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 RNU1-88P-201ENST00000459274 128 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 MRPS33P2-201ENST00000507850 322 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AC006499.6-201ENST00000511169 607 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 SNRPGP16-201ENST00000533275 226 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 RPL23AP88-201ENST00000605759 454 ntBASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3BQ96NU0 AL731532.2-201ENST00000623542 1953 ntBASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3BQ96NU0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms