Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 RNA5SP130-201ENST00000364431 114 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 RN7SKP226-201ENST00000364912 300 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 RNU6-658P-201ENST00000384606 106 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 RNA5SP111-201ENST00000411386 101 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC098614.2-201ENST00000426040 255 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 MTCO2P19-201ENST00000427513 598 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC005300.1-201ENST00000428401 373 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 NANOGNBP1-201ENST00000448444 480 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC003071.1-201ENST00000451219 789 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC026979.1-201ENST00000492525 396 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 RN7SKP122-201ENST00000515923 296 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 OR5BN1P-201ENST00000532955 829 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC024220.1-201ENST00000603675 484 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AL391646.1-201ENST00000603860 190 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 AC005609.4-201ENST00000625071 447 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 U6.99-201ENST00000637524 83 ntBASIC3.05□□□□□ -1.92
CMTM3Q96MX0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.05□□□□□ -1.92
CMTM3Q96MX0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 ZNF680P1-201ENST00000436625 1469 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 CKAP2P1-201ENST00000555477 2049 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 Y_RNA.1-201ENST00000352915 104 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 RNU2-9P-201ENST00000410194 145 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 RNA5SP492-201ENST00000411330 114 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AL031779.1-201ENST00000415663 330 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AL353678.1-201ENST00000422735 741 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 DNAJC19P4-201ENST00000440115 345 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 RPL7P19-201ENST00000469948 618 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 EIF4EP3-201ENST00000498782 656 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 MTCO1P35-201ENST00000515270 228 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 RNU6-572P-201ENST00000516724 80 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 PSMA2P1-201ENST00000526365 646 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC103843.2-201ENST00000530523 682 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC005498.1-201ENST00000592125 465 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC008739.2-201ENST00000597006 317 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AL136363.2-201ENST00000604173 851 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC067959.1-201ENST00000604334 379 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC019159.1-201ENST00000605094 187 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 RNU1-30P-201ENST00000606575 163 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 uc_338.11-201ENST00000619132 160 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 MIR6758-201ENST00000620653 63 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 AC002064.3-201ENST00000623448 346 ntBASIC3.04□□□□□ -1.92
CMTM3Q96MX0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CMTM3Q96MX0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CMTM3Q96MX0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.03□□□□□ -1.92
CMTM3Q96MX0 MIR148B-201ENST00000362252 99 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 RN7SKP227-201ENST00000364445 330 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 RNU6-213P-201ENST00000384051 104 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 Y_RNA.517-201ENST00000384551 106 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 SNORD116-4-201ENST00000384733 96 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 SNORA40C-201ENST00000391285 128 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 SNORA26.7-201ENST00000391288 122 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 RPS4XP8-201ENST00000402039 771 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 RNU4-55P-201ENST00000410731 137 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 USP9YP6-201ENST00000413550 854 ntBASIC3.03□□□□□ -1.92
CMTM3Q96MX0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.03□□□□□ -1.92
CMTM3Q96MX0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.03□□□□□ -1.92
CMTM3Q96MX0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.03□□□□□ -1.92
CMTM3Q96MX0 MYL8P-204ENST00000431574 518 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms