Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-443P-201ENST00000384780 107 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 MIR9-1-201ENST00000385198 89 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 UBA52P6-201ENST00000399822 382 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AL049545.1-201ENST00000401856 572 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 RNU6-195P-201ENST00000411352 109 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 RNU6-516P-201ENST00000411381 104 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AL513331.1-201ENST00000411908 397 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC018630.2-202ENST00000422992 927 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 MTND4P20-201ENST00000424125 869 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 RPS15AP27-201ENST00000449183 343 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC098826.2-201ENST00000452011 651 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC073901.1-201ENST00000462471 408 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC034222.1-201ENST00000494052 532 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC010486.3-201ENST00000511602 785 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 RNA5SP216-201ENST00000516111 123 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 RNU6-1256P-201ENST00000516539 103 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 RNU6-1003P-201ENST00000517099 105 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 NRON-201ENST00000517270 370 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC022616.6-201ENST00000520479 119 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 MTND2P38-201ENST00000522536 667 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 MTND4LP18-201ENST00000526864 291 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC068587.4-201ENST00000533893 186 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC123904.3-201ENST00000547218 814 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 ARL2BPP2-201ENST00000550907 489 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 CYCSP39-201ENST00000565821 309 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 MYL12BP1-201ENST00000569826 507 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 RPS15AP11-201ENST00000594193 385 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC010620.1-201ENST00000601088 1102 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AL356575.1-201ENST00000603008 283 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC093732.2-201ENST00000607950 274 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 OR10AB1P-201ENST00000609613 938 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AL603839.4-201ENST00000624658 1005 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 AP003399.1-201ENST00000637534 361 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AC022336.2-201ENST00000568966 2538 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC00477Q96M19 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LINC00477Q96M19 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC00477Q96M19 MTCO1P9-201ENST00000505577 1534 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LINC00477Q96M19 RNU5E-5P-201ENST00000365379 116 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 RNA5SP210-201ENST00000391034 120 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 RNU6-754P-201ENST00000391166 107 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LINC00477Q96M19 Z85995.1-201ENST00000415547 335 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AL589872.1-201ENST00000426602 288 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AL451062.2-201ENST00000427515 271 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 AL139132.1-201ENST00000431587 344 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 UBE2V1P13-201ENST00000436983 439 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC005094.1-201ENST00000440420 368 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 PGBD4P3-201ENST00000440731 581 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC011816.1-201ENST00000441346 546 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 MTND2P22-201ENST00000444325 1033 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC104389.3-201ENST00000445629 235 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 BMI1P1-201ENST00000445879 941 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 NANOGNBP1-201ENST00000448444 480 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LINC00477Q96M19 snoU13.28-201ENST00000459235 104 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 snoU13.22-201ENST00000459428 104 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AL049714.1-201ENST00000466686 347 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 MTND4LP3-201ENST00000468320 276 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 HIGD1AP13-201ENST00000509878 289 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC117532.1-201ENST00000514638 323 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC022447.1-201ENST00000515358 464 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 AP000907.2-201ENST00000530827 353 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AL356057.1-201ENST00000533798 831 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC121758.2-201ENST00000553271 193 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 PCMTD1P2-201ENST00000565017 355 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 MIR4325-201ENST00000583049 90 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 MIR3117-201ENST00000584034 78 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms