Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AL354685.2-201ENST00000448218 1447 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 SNORA5A-201ENST00000384111 134 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 RPL30P2-201ENST00000414021 291 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC092809.3-201ENST00000415453 231 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC092017.2-201ENST00000427600 362 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC018644.1-201ENST00000429934 551 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 HMGN2P20-201ENST00000437531 273 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-953P-201ENST00000459154 107 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC084357.1-201ENST00000473404 255 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC104619.4-201ENST00000510773 249 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 SNORA31.3-201ENST00000516029 96 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-123P-201ENST00000516163 102 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 RNU1-95P-201ENST00000516357 160 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 SCARNA15.2-201ENST00000516409 127 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-1256P-201ENST00000516539 103 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 SNORA70.18-201ENST00000516696 98 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 RNU1-128P-201ENST00000516704 160 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 SNORD60.2-201ENST00000516883 86 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 ADI1P3-201ENST00000549509 470 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AL121579.1-201ENST00000555129 305 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC008521.1-201ENST00000587471 187 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC174048.1-201ENST00000603389 144 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AL355073.2-201ENST00000612106 557 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC012409.4-201ENST00000612923 249 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 DUXAP9-208ENST00000622815 614 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 CR392039.5-201ENST00000623201 510 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 SNORA50A-202ENST00000629536 136 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDK5RAP3Q96JB5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC090740.1-201ENST00000623193 2262 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 RNA5SP124-201ENST00000362739 110 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 MT-TL1-201ENST00000386347 75 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 MIR1290-201ENST00000408735 78 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 BTF3L4P3-201ENST00000418879 476 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AL356867.1-201ENST00000429623 299 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 SNRPEP4-201ENST00000435815 279 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 ELOCP23-201ENST00000452014 332 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 RN7SL542P-201ENST00000467147 294 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 RN7SL594P-201ENST00000470590 287 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC025465.4-201ENST00000513422 638 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-927P-201ENST00000516199 100 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 TRMT10BP1-201ENST00000519377 943 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AF235103.2-201ENST00000525753 346 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 MIR4738-201ENST00000579134 87 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC010525.2-201ENST00000590920 195 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AL035413.2-201ENST00000604801 525 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AL670379.4-201ENST00000605279 254 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 SNORA51-201ENST00000606420 132 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AC009570.1-201ENST00000609599 745 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 MIR7851-201ENST00000610611 160 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 AL008636.1-201ENST00000625038 1018 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDK5RAP3Q96JB5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDK5RAP3Q96JB5 AC005183.1-201ENST00000603687 1979 ntBASIC3.96□□□□□ -1.77
CDK5RAP3Q96JB5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC068647.1-201ENST00000489539 2265 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AL139276.1-201ENST00000311910 1001 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 FRG1CP-201ENST00000358464 769 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-817P-201ENST00000391083 104 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 FAT1P1-201ENST00000406588 507 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AL606923.1-201ENST00000406616 190 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms