Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 VDAC1P3-201ENST00000434069 851 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 ANP32BP2-201ENST00000454525 545 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AC079140.5-201ENST00000507882 310 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 APOOP4-201ENST00000513530 597 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 RNA5SP208-201ENST00000516156 78 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 RNU6-914P-201ENST00000516749 109 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AC090136.1-201ENST00000520009 240 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 SCOCP1-201ENST00000554676 349 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AC087499.8-201ENST00000578406 226 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 MIR486-1-201ENST00000612171 68 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AC034229.5-201ENST00000624258 185 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AP003400.5-201ENST00000624827 617 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 FAM35DP-201ENST00000323387 2712 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 AC066616.2-201ENST00000559334 1481 ntBASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CTHRC1Q96CG8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 MIR301A-201ENST00000385261 86 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 RNU2-71P-201ENST00000411395 189 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 BX682237.1-201ENST00000415016 335 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 RPL21P109-201ENST00000422213 475 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AL451062.2-201ENST00000427515 271 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 RNU7-167P-201ENST00000459160 62 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 RPS20P22-201ENST00000473700 357 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 RPL21P93-201ENST00000480465 489 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 MTCO1P29-201ENST00000496868 288 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 RNU6-864P-201ENST00000516256 108 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 RN7SKP209-201ENST00000516888 304 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC022695.1-201ENST00000522089 237 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 MIR5187-201ENST00000583479 76 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 BNIP3P25-201ENST00000596023 559 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 CTHRC1P1-201ENST00000605383 469 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC021646.1-201ENST00000605469 484 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 AC006023.2-201ENST00000609916 167 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 uc_338.15-201ENST00000615470 191 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 MIR1302-1-201ENST00000637932 143 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 MAPK10-373ENST00000641983 6772 ntBASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTHRC1Q96CG8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RNU4-79P-201ENST00000362764 141 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RNU6-1167P-201ENST00000363227 94 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.460-201ENST00000384255 102 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RNA5SP424-201ENST00000390988 115 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 SNORA16.2-201ENST00000390991 127 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 RN7SKP27-201ENST00000410684 333 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AL159169.1-201ENST00000421119 127 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 MTND1P14-201ENST00000427400 950 ntBASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.5□□□□□ -1.85
CTHRC1Q96CG8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms