Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC006249.1-201ENST00000621223 471 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TTC28Q96AY4 SDAD1P2-201ENST00000441308 2028 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 RNU6-1180P-201ENST00000364935 107 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TTC28Q96AY4 RNA5SP511-201ENST00000410487 115 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 BX682237.1-201ENST00000415016 335 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 SSXP4-201ENST00000451349 245 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 AC008494.2-201ENST00000514544 370 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 RNU6-386P-201ENST00000362650 107 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 RNU1-52P-201ENST00000384190 164 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 AL139397.2-201ENST00000404529 772 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 RNA5SP25-201ENST00000410815 110 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 RPL36P19-201ENST00000430744 301 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 DPPA3P1-201ENST00000448050 469 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 C1DP3-201ENST00000455013 423 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 AC108157.1-201ENST00000510511 539 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TTC28Q96AY4 SNORA31.13-201ENST00000516624 135 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 RNU4-18P-201ENST00000516751 149 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 HMGB1P46-201ENST00000520062 610 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 SETP2-201ENST00000553886 926 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 AC005786.1-201ENST00000588553 154 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 AL009028.1-201ENST00000604895 802 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 AC024595.1-201ENST00000623088 387 ntBASIC0.92□□□□□ -2.26
TTC28Q96AY4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TTC28Q96AY4 HAUS6P2-201ENST00000433254 2404 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 RNU6-263P-201ENST00000363811 107 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 RNU6-43P-201ENST00000384302 107 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 MIR1207-201ENST00000408249 87 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 Y_RNA.610-201ENST00000410681 103 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 OR51A5P-201ENST00000415429 942 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 TMEM167AP1-201ENST00000423409 219 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AL590233.1-201ENST00000430017 456 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 LSM1P1-201ENST00000438629 273 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.91□□□□□ -2.26
TTC28Q96AY4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AL031183.1-201ENST00000457667 207 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.91□□□□□ -2.26
TTC28Q96AY4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.91□□□□□ -2.26
TTC28Q96AY4 CBX3P7-201ENST00000532876 502 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
TTC28Q96AY4 AP003122.6-201ENST00000623831 495 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 SUMO2P12-201ENST00000405924 140 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 RNU2-40P-201ENST00000410833 196 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TTC28Q96AY4 SUMO1P4-201ENST00000429430 302 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 HMGB1P9-201ENST00000429856 646 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AP000949.1-201ENST00000438328 629 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AL121871.1-201ENST00000443413 436 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 MTCO3P17-201ENST00000443775 513 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 RPL23AP41-201ENST00000484754 458 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 HMGB3P3-201ENST00000510526 400 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AC105914.1-201ENST00000511798 226 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AC112198.4-201ENST00000515450 351 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.91□□□□□ -2.26
TTC28Q96AY4 AC010928.2-201ENST00000588017 287 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 AL133507.1-201ENST00000605269 557 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.91□□□□□ -2.26
TTC28Q96AY4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
TTC28Q96AY4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.9□□□□□ -2.26
TTC28Q96AY4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
TTC28Q96AY4 RNA5SP347-201ENST00000362445 119 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 RNU6-673P-201ENST00000365084 104 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 FO393413.1-201ENST00000402892 195 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 OFD1P18Y-201ENST00000420889 959 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 AL645638.1-201ENST00000440519 361 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 PGBD4P3-201ENST00000440731 581 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 MTND4LP3-201ENST00000468320 276 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 SETP11-201ENST00000473027 690 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 AC104689.1-201ENST00000473356 768 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 ERHP1-201ENST00000523006 310 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 EIF4EP5-201ENST00000528228 640 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 AC007115.1-201ENST00000546853 234 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 ANP32BP3-201ENST00000559213 706 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 AC116618.1-201ENST00000634617 774 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms