Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 BOLA3P4-201ENST00000418151 400 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 AC007098.1-201ENST00000420122 367 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 AL590623.1-201ENST00000427864 105 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.42□□□□□ -2.18
AP3S1Q92572 MTCO1P53-201ENST00000441633 699 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
AP3S1Q92572 FABP5P13-201ENST00000452144 328 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 MTND3P4-201ENST00000453537 303 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 AP001324.2-201ENST00000461163 319 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 RPL9P6-201ENST00000492764 598 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 AP004607.1-201ENST00000524456 203 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.42□□□□□ -2.18
AP3S1Q92572 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.42□□□□□ -2.18
AP3S1Q92572 MIR3167-201ENST00000579623 85 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.42□□□□□ -2.18
AP3S1Q92572 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 BNIP3P33-201ENST00000598912 569 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 AC011451.2-201ENST00000604303 598 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 AC091946.2-201ENST00000606105 291 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S1Q92572 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.42□□□□□ -2.18
AP3S1Q92572 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.42□□□□□ -2.18
AP3S1Q92572 U2.21-201ENST00000637295 81 ntBASIC1.42□□□□□ -2.18
AP3S1Q92572 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
AP3S1Q92572 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
AP3S1Q92572 SNORA25B-201ENST00000365507 128 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 MIR561-201ENST00000385216 97 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 RPL26P27-201ENST00000414397 437 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.41□□□□□ -2.18
AP3S1Q92572 MTATP6P27-201ENST00000416987 621 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.41□□□□□ -2.18
AP3S1Q92572 EIF4EP2-201ENST00000422816 654 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.41□□□□□ -2.18
AP3S1Q92572 AL161651.1-201ENST00000440882 223 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AL831737.1-201ENST00000441288 271 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AL161788.1-201ENST00000441805 169 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.41□□□□□ -2.18
AP3S1Q92572 AL160314.1-201ENST00000490836 438 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 RPS29P11-201ENST00000496507 171 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 RPL38P4-201ENST00000502376 214 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
AP3S1Q92572 AC034114.1-201ENST00000520293 285 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
AP3S1Q92572 AC006199.1-201ENST00000548728 219 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.41□□□□□ -2.18
AP3S1Q92572 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.41□□□□□ -2.18
AP3S1Q92572 AC021739.1-201ENST00000559631 174 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AL354943.1-201ENST00000572103 781 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.41□□□□□ -2.18
AP3S1Q92572 AL158211.4-201ENST00000606988 584 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 MIR6798-201ENST00000612887 67 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AL392048.1-201ENST00000613946 534 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AL596245.1-201ENST00000618994 362 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 AC092192.1-201ENST00000633154 1018 ntBASIC1.41□□□□□ -2.18
AP3S1Q92572 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
AP3S1Q92572 AL136360.1-201ENST00000503377 1900 ntBASIC1.4□□□□□ -2.18
AP3S1Q92572 Z75746.1-201ENST00000440243 2080 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 ZNF876P-202ENST00000398732 1485 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 AL356292.1-201ENST00000283110 373 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 MIR208A-201ENST00000362287 71 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
AP3S1Q92572 MIR95-201ENST00000385072 81 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 MCTS2P-201ENST00000394552 546 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.4□□□□□ -2.19
AP3S1Q92572 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.4□□□□□ -2.19
AP3S1Q92572 AC244505.3-201ENST00000454598 187 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.4□□□□□ -2.19
AP3S1Q92572 RPL31P50-201ENST00000471002 296 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 FO393415.2-201ENST00000480085 343 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.4□□□□□ -2.19
AP3S1Q92572 FAM206BP-201ENST00000510179 541 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.4□□□□□ -2.19
AP3S1Q92572 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
AP3S1Q92572 Y_RNA.675-201ENST00000516389 149 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 SNORA44.1-201ENST00000517031 108 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 HSPE1P18-201ENST00000517602 280 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
AP3S1Q92572 AC104229.1-201ENST00000561364 255 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 RPAP2P1-201ENST00000603626 1168 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 AC016925.2-201ENST00000605108 242 ntBASIC1.4□□□□□ -2.19
AP3S1Q92572 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.4□□□□□ -2.19
AP3S1Q92572 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
AP3S1Q92572 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
AP3S1Q92572 CDC27P3-201ENST00000635418 1910 ntBASIC1.39□□□□□ -2.19
AP3S1Q92572 MIR9-3-201ENST00000385084 90 ntBASIC1.39□□□□□ -2.19
AP3S1Q92572 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
AP3S1Q92572 SNORD65C-201ENST00000390962 71 ntBASIC1.39□□□□□ -2.19
AP3S1Q92572 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
AP3S1Q92572 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.39□□□□□ -2.19
AP3S1Q92572 AC234064.1-201ENST00000436312 247 ntBASIC1.39□□□□□ -2.19
AP3S1Q92572 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.39□□□□□ -2.19
AP3S1Q92572 PTGES3P1-201ENST00000439531 483 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms