Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.51□□□□□ -1.69
DDX1Q92499 FAM27D1-201ENST00000612308 341 ntBASIC4.51□□□□□ -1.69
DDX1Q92499 FAM157A-202ENST00000615155 405 ntBASIC4.51□□□□□ -1.69
DDX1Q92499 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX1Q92499 SDAD1P2-201ENST00000441308 2028 ntBASIC4.51□□□□□ -1.69
DDX1Q92499 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX1Q92499 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX1Q92499 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.51□□□□□ -1.69
DDX1Q92499 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
DDX1Q92499 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
DDX1Q92499 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
DDX1Q92499 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
DDX1Q92499 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DDX1Q92499 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX1Q92499 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DDX1Q92499 Y_RNA.153-201ENST00000363615 91 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 Y_RNA.252-201ENST00000364556 101 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DDX1Q92499 RNU6-1040P-201ENST00000383974 107 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 Y_RNA.646-201ENST00000410980 101 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 RNU4-61P-201ENST00000411243 107 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX1Q92499 RPL21P66-201ENST00000426566 466 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 HMGB1P27-201ENST00000431429 603 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX1Q92499 AL162395.1-201ENST00000457882 422 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 RNU6-953P-201ENST00000459154 107 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 MIR2053-201ENST00000459295 91 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC092451.1-201ENST00000480211 153 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC079140.5-201ENST00000507882 310 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX1Q92499 AC107222.1-201ENST00000510899 637 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC008958.1-201ENST00000511047 682 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 SNORA25.10-201ENST00000515926 124 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 RNA5SP519-201ENST00000516480 119 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 RNU6-1038P-201ENST00000516516 104 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 RN7SKP258-201ENST00000517151 304 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC009812.2-201ENST00000517657 457 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX1Q92499 AP002404.1-201ENST00000532005 451 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX1Q92499 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX1Q92499 AC010653.1-201ENST00000571108 881 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 MIR4790-201ENST00000577799 79 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.5□□□□□ -1.69
DDX1Q92499 Z82243.1-201ENST00000609432 473 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC107871.2-201ENST00000612894 502 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AL157817.1-201ENST00000614264 790 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 AC007485.1-201ENST00000616755 206 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DDX1Q92499 PRO1804-201ENST00000623780 2050 ntBASIC4.5□□□□□ -1.69
DDX1Q92499 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DDX1Q92499 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
DDX1Q92499 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX1Q92499 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX1Q92499 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX1Q92499 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX1Q92499 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX1Q92499 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX1Q92499 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX1Q92499 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX1Q92499 MTND2P29-201ENST00000438595 412 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 RPL12P25-201ENST00000455592 494 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX1Q92499 AP000873.1-201ENST00000463987 400 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 Y_RNA.654-201ENST00000497848 106 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 TRBVA-201ENST00000498804 316 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 AL359273.1-201ENST00000510918 627 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 AC023141.12-201ENST00000512399 199 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX1Q92499 SNORA31.8-201ENST00000516327 108 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 RNU6-677P-201ENST00000516914 101 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX1Q92499 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX1Q92499 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.49□□□□□ -1.69
DDX1Q92499 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.49□□□□□ -1.69
DDX1Q92499 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.49□□□□□ -1.69
DDX1Q92499 MTCO3P23-201ENST00000561363 289 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX1Q92499 AL158032.1-201ENST00000605401 106 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 AP002826.1-201ENST00000608835 315 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 MIR8059-201ENST00000620427 81 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX1Q92499 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.49□□□□□ -1.69
DDX1Q92499 AC018529.3-201ENST00000624212 2254 ntBASIC4.49□□□□□ -1.69
DDX1Q92499 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX1Q92499 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DDX1Q92499 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
DDX1Q92499 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
DDX1Q92499 SNORA63.1-201ENST00000362493 131 ntBASIC4.48□□□□□ -1.69
DDX1Q92499 Y_RNA.257-201ENST00000364596 102 ntBASIC4.48□□□□□ -1.69
DDX1Q92499 Y_RNA.463-201ENST00000384271 102 ntBASIC4.48□□□□□ -1.69
DDX1Q92499 AL360182.1-201ENST00000397433 468 ntBASIC4.48□□□□□ -1.69
DDX1Q92499 UBE2V1P2-201ENST00000397758 440 ntBASIC4.48□□□□□ -1.69
DDX1Q92499 MIR1179-201ENST00000408703 91 ntBASIC4.48□□□□□ -1.69
DDX1Q92499 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.48□□□□□ -1.69
DDX1Q92499 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.48□□□□□ -1.69
DDX1Q92499 RPL23AP89-201ENST00000439324 255 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms