Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 MTCO2P11-201ENST00000431069 680 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 FCF1P1-201ENST00000432690 571 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RPS20P5-201ENST00000434808 360 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RPS15AP9-201ENST00000439856 381 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RPS27AP1-201ENST00000475545 471 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RN7SKP132-201ENST00000516001 208 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 RNU6-445P-201ENST00000516949 107 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC090572.1-201ENST00000519251 160 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC087883.1-201ENST00000551882 391 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 MIR4319-201ENST00000577285 85 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 MIR4474-201ENST00000579189 78 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC138761.3-201ENST00000579993 334 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 GLUD1P4-201ENST00000590914 418 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AP002826.1-201ENST00000608835 315 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC010133.1-201ENST00000615809 842 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 SNHG22-203ENST00000617833 660 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 PLCE1P1-201ENST00000622094 305 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 AC138915.3-201ENST00000562908 1389 ntBASIC2.33□□□□□ -2.04
LINC01006Q8NI28 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01006Q8NI28 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 RPL7P26-201ENST00000333817 754 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 RNA5SP126-201ENST00000365092 109 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 MIR514A1-201ENST00000385133 98 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 MIR493-201ENST00000385254 89 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 RNU6-328P-201ENST00000390887 106 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 GSTA9P-201ENST00000406231 611 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 U3.42-201ENST00000408746 214 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 RPL21P40-201ENST00000428586 483 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 HMGN2P20-201ENST00000437531 273 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AL136380.1-201ENST00000447970 162 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 RPL9P33-201ENST00000484311 566 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC107401.1-201ENST00000503426 685 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 HMGB1P41-201ENST00000520234 440 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AP001804.3-201ENST00000525146 880 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 OR5G4P-201ENST00000525251 760 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 FAM92A1P1-201ENST00000528023 890 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC011602.1-201ENST00000546484 331 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC128657.1-201ENST00000549459 145 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AL845331.3-202ENST00000562856 261 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AC080078.2-201ENST00000603766 501 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AL391646.1-201ENST00000603860 190 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 ATP1B3P1-201ENST00000605365 821 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AL121992.2-201ENST00000606262 256 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AF250324.2-201ENST00000608299 610 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 SDR42E1P2-201ENST00000614861 481 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 MIR7153-201ENST00000637758 57 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 OR5H6-203ENST00000642105 978 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AL136360.1-201ENST00000503377 1900 ntBASIC2.32□□□□□ -2.04
LINC01006Q8NI28 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01006Q8NI28 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 FTLP6-201ENST00000355274 422 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.159-201ENST00000363674 87 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 RNU6-1284P-201ENST00000363701 100 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 RNU5E-6P-201ENST00000365574 115 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 RNU6-701P-201ENST00000384059 107 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 SNORA18.3-201ENST00000384122 132 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 SNORA48.8-201ENST00000391324 134 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms