Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ELF2P3-201ENST00000445099 1506 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 SNORA38.1-201ENST00000364172 131 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RNU4-12P-201ENST00000365233 139 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RNU6-741P-201ENST00000383889 107 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AL591034.1-201ENST00000407447 340 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 Z85995.1-201ENST00000415547 335 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RPL7P54-201ENST00000438336 674 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC003071.1-201ENST00000451219 789 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RNU7-63P-201ENST00000459054 62 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RPL37P6-201ENST00000460682 294 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC006512.1-201ENST00000468816 291 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RN7SL330P-201ENST00000469709 307 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RPL36AP51-201ENST00000487216 318 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RPL30P5-201ENST00000494923 336 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 FCF1P3-201ENST00000496394 590 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RNA5SP291-201ENST00000517222 105 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 RN7SKP57-201ENST00000517248 293 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 OR5B19P-201ENST00000531766 928 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 OR5AL2P-201ENST00000532185 920 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC026333.2-201ENST00000542164 106 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 MIR4775-201ENST00000581168 75 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC007621.1-201ENST00000604544 437 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AP001596.2-201ENST00000608410 312 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AP001486.3-201ENST00000615334 372 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 uc_338.11-201ENST00000619132 160 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 MTND5P42-201ENST00000637720 498 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AC032011.1-201ENST00000611703 1549 ntBASIC3.13□□□□□ -1.91
BEST3Q8N1M1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST3Q8N1M1 AF127577.6-201ENST00000623352 2191 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 RNY4P14-201ENST00000363656 96 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 SNORA62.1-201ENST00000364287 154 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 RNU6-61P-201ENST00000365528 109 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 Y_RNA.402-201ENST00000383972 102 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 Y_RNA.450-201ENST00000384198 113 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AC068050.1-201ENST00000394891 380 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AL109913.1-201ENST00000421173 514 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AL606489.2-201ENST00000433886 234 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 SNRPGP3-201ENST00000469405 227 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AC083798.1-201ENST00000472671 131 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AL160314.1-201ENST00000490836 438 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 TTC39CP1-201ENST00000512513 755 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AP001094.1-201ENST00000579805 193 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 MIR7112-201ENST00000616126 65 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 MIR1321-201ENST00000637766 79 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms