Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
HERC6Q8IVU3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HERC6Q8IVU3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.59□□□□□ -1.84
HERC6Q8IVU3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC233263.6-201ENST00000631132 1963 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 MIR325-201ENST00000385260 98 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 MIR591-201ENST00000385290 95 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 MTCO1P21-201ENST00000416634 589 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC073464.1-201ENST00000429823 534 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 RPL23AP69-201ENST00000431134 458 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC132479.1-201ENST00000449160 144 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 MRPS31P2-201ENST00000451581 518 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC126389.1-201ENST00000477436 290 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC012181.1-201ENST00000479895 423 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC006445.2-201ENST00000510061 472 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 SCARNA24.1-201ENST00000516465 137 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AP006245.1-201ENST00000522549 120 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 OR4R1P-201ENST00000529879 463 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC011602.1-201ENST00000546484 331 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC005476.1-201ENST00000554427 397 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AL022154.1-201ENST00000604698 785 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC004492.1-201ENST00000607036 742 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 PLCE1P1-201ENST00000622094 305 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 AC091152.2-201ENST00000591628 2569 ntBASIC3.58□□□□□ -1.84
HERC6Q8IVU3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HERC6Q8IVU3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 RNA5SP126-201ENST00000365092 109 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 RNU6-946P-201ENST00000383878 107 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 USP9YP28-201ENST00000435142 589 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 HMGB3P11-201ENST00000440127 604 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC093899.1-201ENST00000457984 376 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC092798.1-201ENST00000458542 409 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC068647.1-201ENST00000489539 2265 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 HMGB1P29-201ENST00000505659 499 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC026333.2-201ENST00000542164 106 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC007363.1-201ENST00000604736 620 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 Z84480.1-201ENST00000605131 311 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC087241.4-201ENST00000612441 480 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AC009161.2-201ENST00000624626 138 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 U6.98-201ENST00000637157 84 ntBASIC3.57□□□□□ -1.84
HERC6Q8IVU3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.57□□□□□ -1.84
HERC6Q8IVU3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 MTND5P29-201ENST00000458676 1807 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 MTND5P26-201ENST00000426018 1752 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 UBE2L2-201ENST00000254302 429 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 RNU6-179P-201ENST00000363350 107 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 RNU6-188P-201ENST00000364207 107 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 SMIM11P1-201ENST00000369586 178 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 RNU6-387P-201ENST00000411331 105 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 Z99755.1-201ENST00000414048 380 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AC092047.1-201ENST00000424997 240 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 ZNF863P-201ENST00000426746 417 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 DPPA2P1-201ENST00000428060 556 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AL353705.1-201ENST00000433468 480 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AL357552.1-201ENST00000445254 415 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 FABP5P13-201ENST00000452144 328 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 MTCYBP1-201ENST00000454315 1119 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 RPL39P36-201ENST00000490784 156 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AC116562.3-201ENST00000506136 177 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms