Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC125238.1-201ENST00000448842 249 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC074050.1-201ENST00000563247 211 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 MIR5680-201ENST00000577577 84 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC103810.1-201ENST00000579873 453 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 MIR3611-201ENST00000584484 83 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC245014.2-201ENST00000603689 287 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC246785.4-201ENST00000605374 287 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AP002360.4-201ENST00000606980 481 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC006566.1-201ENST00000608943 513 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC092656.1-203ENST00000624134 423 ntBASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.98□□□□□ -1.93
NUP54Q7Z3B4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 RNU4-24P-201ENST00000364565 139 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 SNORA26.7-201ENST00000391288 122 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AL357075.1-201ENST00000404107 726 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 RNU6-195P-201ENST00000411352 109 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 NDUFB4P5-201ENST00000415445 361 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 HMGB1P27-201ENST00000431429 603 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 MTCO3P5-201ENST00000433620 714 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 RPS24P1-201ENST00000438550 371 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 NEFMP1-201ENST00000443423 1006 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 Z75741.1-201ENST00000446793 314 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 KLF3P2-201ENST00000465138 268 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC109925.1-201ENST00000478069 331 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 RNA5SP217-201ENST00000515959 91 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 RN7SKP40-201ENST00000517211 242 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC087883.1-201ENST00000551882 391 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 RPL21P12-201ENST00000559810 515 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 FTX_3.1-201ENST00000610451 147 ntBASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP54Q7Z3B4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC073343.1-201ENST00000328239 651 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 SNORA38.1-201ENST00000364172 131 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 Y_RNA.359-201ENST00000365498 102 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 U8.9-201ENST00000365667 134 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 RNU6-1119P-201ENST00000384349 108 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 RNU6-14P-201ENST00000384630 106 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 DEFB108C-201ENST00000400154 252 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC063979.1-201ENST00000415539 377 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 PIGFP2-201ENST00000421400 651 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC006946.1-201ENST00000429106 328 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC092427.1-202ENST00000430569 476 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 GTF2IP20-201ENST00000431663 360 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AL513043.1-201ENST00000439124 535 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 RPL21P2-201ENST00000440049 481 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 WASF1P1-201ENST00000447560 1131 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 RPL26P9-201ENST00000457466 433 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 SCARNA20.6-201ENST00000517251 106 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 HMGB1P41-201ENST00000520234 440 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AP003072.2-201ENST00000527756 676 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms