Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC130324.3-201ENST00000614165 542 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AC093913.1-201ENST00000614178 329 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 CR392039.5-201ENST00000623201 510 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AC011155.2-201ENST00000623202 216 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 MTND4P14-201ENST00000435799 1354 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU6-989P-201ENST00000362756 107 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNA5SP197-201ENST00000363357 119 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU4-66P-201ENST00000365199 138 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 SNORD116-29-201ENST00000384516 83 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 PTMAP2-201ENST00000397627 327 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AL359634.1-202ENST00000404721 284 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU4-26P-201ENST00000410270 107 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU2-29P-201ENST00000410423 189 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RN7SKP177-201ENST00000410567 355 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU2-39P-201ENST00000410604 198 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU4-14P-201ENST00000410858 122 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 HMGN1P24-201ENST00000412282 298 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RPL31P12-201ENST00000422587 358 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RPS3AP52-201ENST00000435639 297 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC010401.1-201ENST00000463867 348 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC091885.1-201ENST00000506658 268 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 HIGD1AP3-201ENST00000515857 278 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU2-10P-201ENST00000516375 211 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNU7-51P-201ENST00000516560 62 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC005668.1-201ENST00000571142 476 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 MIR5583-1-201ENST00000580941 59 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 BNIP3P25-201ENST00000596023 559 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC245389.1-201ENST00000605141 529 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 RNA5SP108-201ENST00000605921 117 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AC110801.1-201ENST00000623590 212 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 AL034408.1-202ENST00000636088 415 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 MIR7153-201ENST00000637758 57 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 ZNF734P-201ENST00000419494 1534 ntBASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF549Q6P9A3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 RNU4-35P-201ENST00000362588 141 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 RNU6-356P-201ENST00000384140 107 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AL136372.1-201ENST00000403060 228 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 RNU2-47P-201ENST00000410649 186 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC114491.1-201ENST00000416095 246 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC073063.1-201ENST00000434352 607 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 HMGB3P11-201ENST00000440127 604 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 PRPS1P1-201ENST00000445305 876 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 RPL21P23-201ENST00000446654 460 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC020550.1-201ENST00000447385 163 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 NIPA2P5-201ENST00000452282 464 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 RPL23AP14-201ENST00000468281 468 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AP002812.1-201ENST00000495378 474 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC135721.1-201ENST00000497954 479 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 KLHL2P1-201ENST00000508691 521 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 IGKV2-26-201ENST00000518305 343 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC005476.1-201ENST00000554427 397 ntBASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms