Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AL132838.2-201ENST00000492041 314 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC022493.1-201ENST00000492984 337 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 MTCYBP18-201ENST00000501056 747 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC074344.1-201ENST00000512823 224 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 RNU2-69P-201ENST00000516061 100 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC009902.1-201ENST00000519351 183 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC025755.1-201ENST00000521306 278 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 CENPUP1-201ENST00000526649 1202 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AL355598.1-201ENST00000604169 202 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AL035413.2-201ENST00000604801 525 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 U2.17-201ENST00000611454 95 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AL445567.2-201ENST00000618935 498 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC006504.8-201ENST00000621046 635 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AP003400.5-201ENST00000624827 617 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 RNU6-884P-201ENST00000363889 107 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 RNU6-1179P-201ENST00000384667 107 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 RNU4-26P-201ENST00000410270 107 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 BX323014.1-201ENST00000412876 237 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 HMGB1P37-201ENST00000439613 609 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 snoU13.28-201ENST00000459235 104 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 Y_RNA.654-201ENST00000497848 106 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC110768.1-201ENST00000509222 400 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC112206.3-201ENST00000514578 389 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 SNORA31.1-201ENST00000515993 133 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 SNORA31.5-201ENST00000516190 133 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC118273.2-201ENST00000532092 465 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC091516.1-201ENST00000549191 703 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 MTCO3P23-201ENST00000561363 289 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 RN7SL600P-201ENST00000581811 299 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 MIR3941-201ENST00000582572 103 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC012119.1-201ENST00000603184 222 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 BNIP3P10-201ENST00000605360 577 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 MIR6868-201ENST00000611215 58 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 DUXAP9-208ENST00000622815 614 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 AC022418.1-201ENST00000624118 445 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 MIR7153-201ENST00000637758 57 ntBASIC3.67□□□□□ -1.82
RNF220Q5VTB9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RNF220Q5VTB9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 MIR412-201ENST00000362142 91 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 Y_RNA.88-201ENST00000363029 99 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 Y_RNA.390-201ENST00000383932 102 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 RNU6-876P-201ENST00000391295 104 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 HMGN2P30-201ENST00000423237 256 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC073063.1-201ENST00000434352 607 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 PRPS1P1-201ENST00000445305 876 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC010099.1-201ENST00000455434 375 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 RNU7-167P-201ENST00000459160 62 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 HMGN2P26-201ENST00000463169 339 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 RN7SL860P-201ENST00000473738 223 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 RPL21P13-201ENST00000488305 481 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 TRBV12-2-201ENST00000489763 344 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC018710.1-201ENST00000506509 158 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 RNU1-103P-201ENST00000516502 125 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 RNU6-1038P-201ENST00000516516 104 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AP000867.2-201ENST00000532468 320 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 OR11H5P-201ENST00000554039 926 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AL118558.2-201ENST00000556294 238 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms