Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 RNU6-105P-201ENST00000363909 104 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 RNU6-1263P-201ENST00000384601 106 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 PTGES3P2-201ENST00000407942 482 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC004022.2-201ENST00000413824 193 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 OSTCP8-201ENST00000445117 448 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC079448.1-201ENST00000449377 373 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC093770.1-201ENST00000511559 571 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 OR10V3P-201ENST00000525712 725 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 MIR3117-201ENST00000584034 78 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 DUSP12P1-201ENST00000612874 516 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC110079.1-202ENST00000635213 138 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 SNORA3A-201ENST00000364113 130 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 RNU6-35P-201ENST00000384530 107 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 RNA5SP127-201ENST00000411051 133 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 VN1R36P-201ENST00000414936 291 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 ZNF965P-201ENST00000432501 817 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 TPTE2P6-202ENST00000445572 1007 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC093510.2-201ENST00000562820 896 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC090616.5-202ENST00000582111 297 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 RNU4-31P-201ENST00000384211 141 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC004022.1-201ENST00000447766 1066 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC105914.1-201ENST00000511798 226 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 CENPUP2-201ENST00000555897 1186 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 CCNB2P1-201ENST00000399411 1150 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 UBE2V1P9-201ENST00000414760 368 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AC000111.3-201ENST00000433478 193 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AC055731.1-201ENST00000474387 401 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 MIR3616-201ENST00000584070 92 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 HAUS6P2-201ENST00000433254 2404 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 RNU6-225P-201ENST00000384613 103 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 MRPL35P3-201ENST00000421557 364 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AC004812.1-201ENST00000540773 146 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AL160236.1-201ENST00000556317 195 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 MIR4529-201ENST00000578110 78 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 CUL4AP1-201ENST00000514750 1863 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 RNU1-72P-201ENST00000362976 153 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AC025165.5-201ENST00000602802 578 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AL592148.2-201ENST00000612210 372 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 OR4G3P-201ENST00000633500 913 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AL589743.1-201ENST00000551932 2712 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 AL137003.2-201ENST00000606924 2538 ntBASIC0.44□□□□□ -2.34
VPS13DQ5THJ4 RNU6-1164P-201ENST00000364428 107 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 MIR607-201ENST00000385241 96 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 LINC01347-201ENST00000417964 355 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC241520.1-201ENST00000422654 1099 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 GTF2IP12-201ENST00000456547 356 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC114786.4-201ENST00000508771 728 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC114797.1-201ENST00000514003 728 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 MIR924-201ENST00000638017 53 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 MIR6086-201ENST00000638065 55 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AL353898.1-201ENST00000444055 238 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 MIR4653-201ENST00000585107 83 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AL158032.1-201ENST00000605401 106 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC012443.1-201ENST00000605605 231 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 ZNF29P-201ENST00000225587 168 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC103851.1-201ENST00000506833 274 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AL161912.3-201ENST00000605404 628 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AL133384.1-201ENST00000412744 351 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 AC067942.3-201ENST00000512025 362 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 MIR3198-2-201ENST00000577868 80 ntBASIC0.43□□□□□ -2.34
VPS13DQ5THJ4 RNU6-16P-201ENST00000384385 107 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 AC010099.1-201ENST00000455434 375 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 AC117454.1-201ENST00000491120 168 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 OR5AL2P-201ENST00000532185 920 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 CYP4A27P-201ENST00000567218 190 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 RNU6-1235P-201ENST00000384559 107 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 RNU6-498P-201ENST00000459468 107 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 KLF3P2-201ENST00000465138 268 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms