Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC090574.1-201ENST00000623186 233 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 MIR4275-201ENST00000636486 87 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 RPL7P26-201ENST00000333817 754 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 RNA5SP267-201ENST00000364893 126 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 Y_RNA.419-201ENST00000384041 102 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 MIR514A1-201ENST00000385133 98 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 SOD2P1-201ENST00000396543 562 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AL122016.1-201ENST00000403365 367 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC092809.3-201ENST00000415453 231 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 VDAC1P3-201ENST00000434069 851 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC083863.1-201ENST00000438811 231 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 NEFMP1-201ENST00000443423 1006 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 DDX3P2-201ENST00000446138 111 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 RPL21P23-201ENST00000446654 460 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 RPS3AP46-201ENST00000448352 682 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC073415.1-201ENST00000449240 153 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 RNU6-261P-201ENST00000459506 102 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AL049830.2-201ENST00000480072 201 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 RPL31P13-201ENST00000484151 370 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 HMGN1P13-201ENST00000505795 138 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 SNORA31.8-201ENST00000516327 108 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 SUMO2P20-201ENST00000520803 283 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 OR5D17P-201ENST00000531492 978 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 OR5BN1P-201ENST00000532955 829 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC010525.2-201ENST00000590920 195 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC104662.1-201ENST00000604448 511 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 DISC2.1-201ENST00000612827 205 ntBASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A4Q53GD3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.9□□□□□ -1.78
SLC44A4Q53GD3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
SLC44A4Q53GD3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.78
SLC44A4Q53GD3 FRG1CP-201ENST00000358464 769 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 RNU1-18P-201ENST00000363062 164 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 Y_RNA.255-201ENST00000364581 97 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 Y_RNA.460-201ENST00000384255 102 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 RNU6-14P-201ENST00000384630 106 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AL158156.1-201ENST00000422509 473 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AC097713.2-201ENST00000430199 356 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 ARF4P2-201ENST00000430209 526 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 RPL36AP53-201ENST00000432891 316 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 CBWD4P-201ENST00000445695 655 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AL118520.1-201ENST00000450770 291 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 FABP5P13-201ENST00000452144 328 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 BX510359.1-201ENST00000456973 237 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 RNU7-182P-201ENST00000459009 62 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 SNORA59A-201ENST00000459326 152 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 RBBP4P6-201ENST00000508098 202 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 PSMA2P1-201ENST00000526365 646 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AC023050.3-201ENST00000541142 333 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AC106900.2-201ENST00000604994 317 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 RNU1-30P-201ENST00000606575 163 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AC011155.2-201ENST00000623202 216 ntBASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SLC44A4Q53GD3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 NACAP2-201ENST00000318548 624 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 DEFB108F-201ENST00000344638 222 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms