Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.8□□□□□ -2.12
SSX1Q16384 RNU2-40P-201ENST00000410833 196 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 RNU6-920P-201ENST00000410926 92 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AL139156.1-201ENST00000412785 841 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AL135786.1-201ENST00000415892 214 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 NPM1P11-201ENST00000417106 855 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 BTF3L4P3-201ENST00000418879 476 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX1Q16384 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX1Q16384 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.8□□□□□ -2.12
SSX1Q16384 EEF1B2P7-201ENST00000451177 676 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 USP9YP10-201ENST00000454868 628 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC010631.1-201ENST00000474150 156 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC096571.1-202ENST00000506634 735 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 RNU6-390P-201ENST00000516259 103 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC009063.1-201ENST00000563342 702 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC007151.1-201ENST00000572774 483 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 MIR5571-201ENST00000577998 113 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX1Q16384 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX1Q16384 AL391813.1-201ENST00000603098 260 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AC021171.1-201ENST00000603137 706 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC245297.2-201ENST00000610119 565 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC107075.1-201ENST00000613695 314 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AC109809.1-201ENST00000619665 545 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AC098657.3-201ENST00000620434 263 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 AC006386.2-201ENST00000624491 75 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AC012005.1-201ENST00000624575 75 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX1Q16384 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.8□□□□□ -2.12
SSX1Q16384 ZNF355P-201ENST00000427301 3216 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SSX1Q16384 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
SSX1Q16384 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSX1Q16384 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX1Q16384 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX1Q16384 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
SSX1Q16384 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SSX1Q16384 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSX1Q16384 FAM133CP-201ENST00000332869 704 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 RNU6-853P-201ENST00000364306 107 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 USP9YP33-201ENST00000412220 421 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX1Q16384 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.79□□□□□ -2.12
SSX1Q16384 AC027124.2-201ENST00000428249 105 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 AL356320.1-201ENST00000429616 163 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 USP9YP35-201ENST00000435696 412 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 GPM6BP3-201ENST00000442797 145 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 AL358794.1-201ENST00000445689 381 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 MTCO1P27-201ENST00000448269 226 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 PAXBP1P1-201ENST00000449315 447 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.79□□□□□ -2.12
SSX1Q16384 ANKRD26P4-201ENST00000455755 950 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 AC096576.1-201ENST00000489014 359 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SSX1Q16384 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.79□□□□□ -2.12
SSX1Q16384 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX1Q16384 AC109445.1-201ENST00000512356 383 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.79□□□□□ -2.12
SSX1Q16384 AC010186.2-204ENST00000537668 439 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.79□□□□□ -2.12
SSX1Q16384 NACAP3-201ENST00000552100 481 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSX1Q16384 AL133153.1-201ENST00000557756 303 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.79□□□□□ -2.12
SSX1Q16384 AL138976.2-201ENST00000563989 694 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 MIR3199-1-201ENST00000582434 88 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.79□□□□□ -2.12
SSX1Q16384 AC007938.3-201ENST00000604965 623 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 AL133445.2-201ENST00000611191 527 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 AL449363.1-201ENST00000617815 186 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 PCMTD1P7-201ENST00000634506 357 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 MIR3199-2-201ENST00000636243 86 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSX1Q16384 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX1Q16384 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 MTND5P29-201ENST00000458676 1807 ntBASIC1.79□□□□□ -2.12
SSX1Q16384 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
SSX1Q16384 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSX1Q16384 RNU6-1167P-201ENST00000363227 94 ntBASIC1.78□□□□□ -2.12
SSX1Q16384 SNORA16B-201ENST00000364674 135 ntBASIC1.78□□□□□ -2.12
SSX1Q16384 SNORA46.1-201ENST00000391069 153 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms