Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.44□□□□□ -2.18
HMGXB3Q12766 AC093752.1-206ENST00000511823 336 ntBASIC1.44□□□□□ -2.18
HMGXB3Q12766 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGXB3Q12766 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGXB3Q12766 AC090517.3-201ENST00000625170 141 ntBASIC1.44□□□□□ -2.18
HMGXB3Q12766 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMGXB3Q12766 SNORA38-201ENST00000363946 132 ntBASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 HMGN2P10-201ENST00000448085 265 ntBASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC018437.1-201ENST00000492214 406 ntBASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC090616.3-201ENST00000582184 217 ntBASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGXB3Q12766 MIR2909-201ENST00000617113 69 ntBASIC1.43□□□□□ -2.18
HMGXB3Q12766 AL049737.1-201ENST00000413920 1403 ntBASIC1.43□□□□□ -2.18
HMGXB3Q12766 AC009812.4-201ENST00000569134 1805 ntBASIC1.43□□□□□ -2.18
HMGXB3Q12766 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMGXB3Q12766 MIR676-201ENST00000390702 67 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 RNU6-837P-201ENST00000391056 108 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 SNORD65-201ENST00000391079 73 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 RPL7P30-201ENST00000420888 709 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGXB3Q12766 snoU13.7-201ENST00000459220 104 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 MRPS17P9-201ENST00000511924 393 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 AC133963.2-201ENST00000513686 578 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 AC104229.1-201ENST00000561364 255 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGXB3Q12766 AC092474.3-201ENST00000603022 568 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 AL009028.1-201ENST00000604895 802 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 HMGB1P24-202ENST00000615653 685 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 AC126177.8-201ENST00000618339 1015 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 AC068880.5-201ENST00000624331 290 ntBASIC1.42□□□□□ -2.18
HMGXB3Q12766 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMGXB3Q12766 Y_RNA.60-201ENST00000362831 98 ntBASIC1.41□□□□□ -2.18
HMGXB3Q12766 RNU6-1251P-201ENST00000364502 107 ntBASIC1.41□□□□□ -2.18
HMGXB3Q12766 SNORD23.1-201ENST00000408212 104 ntBASIC1.41□□□□□ -2.18
HMGXB3Q12766 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 JTBP1-201ENST00000441314 247 ntBASIC1.41□□□□□ -2.18
HMGXB3Q12766 AL022238.1-201ENST00000442557 355 ntBASIC1.41□□□□□ -2.18
HMGXB3Q12766 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 AC078857.1-201ENST00000469870 667 ntBASIC1.41□□□□□ -2.18
HMGXB3Q12766 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMGXB3Q12766 AC107954.1-201ENST00000565906 727 ntBASIC1.41□□□□□ -2.18
HMGXB3Q12766 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 AC004908.2-201ENST00000609090 574 ntBASIC1.41□□□□□ -2.18
HMGXB3Q12766 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGXB3Q12766 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.4□□□□□ -2.18
HMGXB3Q12766 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.4□□□□□ -2.18
HMGXB3Q12766 AL358176.2-201ENST00000425769 204 ntBASIC1.4□□□□□ -2.18
HMGXB3Q12766 AC016691.1-201ENST00000441321 413 ntBASIC1.4□□□□□ -2.18
HMGXB3Q12766 AL500527.1-201ENST00000448532 255 ntBASIC1.4□□□□□ -2.18
HMGXB3Q12766 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.4□□□□□ -2.18
HMGXB3Q12766 RNU11-2P-201ENST00000516898 142 ntBASIC1.4□□□□□ -2.18
HMGXB3Q12766 BTF3P12-201ENST00000519620 469 ntBASIC1.4□□□□□ -2.18
HMGXB3Q12766 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.4□□□□□ -2.18
HMGXB3Q12766 AC133485.1-201ENST00000567176 124 ntBASIC1.4□□□□□ -2.18
HMGXB3Q12766 AC138907.6-201ENST00000568401 126 ntBASIC1.4□□□□□ -2.18
HMGXB3Q12766 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMGXB3Q12766 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMGXB3Q12766 AL139397.2-201ENST00000404529 772 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 RNU6-193P-201ENST00000410977 107 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 AC092745.2-202ENST00000411880 369 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGXB3Q12766 AC093155.1-201ENST00000440164 826 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 RPL31P58-201ENST00000469001 379 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGXB3Q12766 AP003072.2-201ENST00000527756 676 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMGXB3Q12766 AC005332.10-201ENST00000612725 619 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 SDR42E1P2-201ENST00000614861 481 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGXB3Q12766 SDR42E1P4-201ENST00000620894 481 ntBASIC1.4□□□□□ -2.19
HMGXB3Q12766 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGXB3Q12766 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HMGXB3Q12766 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.4□□□□□ -2.19
HMGXB3Q12766 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGXB3Q12766 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGXB3Q12766 AC244035.1-201ENST00000430042 390 ntBASIC1.39□□□□□ -2.19
HMGXB3Q12766 NAP1L1P3-201ENST00000462291 880 ntBASIC1.39□□□□□ -2.19
HMGXB3Q12766 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.39□□□□□ -2.19
HMGXB3Q12766 SNORA31.8-201ENST00000516327 108 ntBASIC1.39□□□□□ -2.19
HMGXB3Q12766 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGXB3Q12766 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGXB3Q12766 MIR3117-201ENST00000584034 78 ntBASIC1.39□□□□□ -2.19
HMGXB3Q12766 MTCO2P22-201ENST00000603246 681 ntBASIC1.39□□□□□ -2.19
HMGXB3Q12766 MTND4LP5-201ENST00000605152 292 ntBASIC1.39□□□□□ -2.19
HMGXB3Q12766 BX322635.1-201ENST00000605804 496 ntBASIC1.39□□□□□ -2.19
HMGXB3Q12766 AC107214.2-201ENST00000608204 634 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms