Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.63□□□□□ -2.31
TFF3Q07654 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.63□□□□□ -2.31
TFF3Q07654 CYCSP2-201ENST00000558168 301 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 AC087465.1-201ENST00000560574 245 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 CYP4A27P-201ENST00000567218 190 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.63□□□□□ -2.31
TFF3Q07654 MIR4529-201ENST00000578110 78 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 AC006963.1-201ENST00000624003 1052 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 AC008133.2-201ENST00000624540 351 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 AC090517.3-201ENST00000625170 141 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 MIR6866-201ENST00000638146 69 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 HAUS6P2-201ENST00000433254 2404 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 RNU6-1235P-201ENST00000384559 107 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC092047.1-201ENST00000424997 240 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC009296.1-201ENST00000443146 155 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 ARL5AP2-201ENST00000444698 533 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.62□□□□□ -2.31
TFF3Q07654 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.62□□□□□ -2.31
TFF3Q07654 C1DP3-201ENST00000455013 423 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 RNA5SP310-201ENST00000459084 116 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 RNU6-498P-201ENST00000459468 107 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 KLF3P2-201ENST00000465138 268 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 RN7SKP5-201ENST00000517045 272 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 OR10V3P-201ENST00000525712 725 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.62□□□□□ -2.31
TFF3Q07654 MIR1273G-201ENST00000577677 100 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.62□□□□□ -2.31
TFF3Q07654 AC105245.1-201ENST00000581934 244 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC005786.1-201ENST00000588553 154 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AL355812.1-201ENST00000603215 216 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC113194.1-201ENST00000606037 500 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.62□□□□□ -2.31
TFF3Q07654 AC106800.4-201ENST00000614905 153 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 ZNF702P-202ENST00000434269 1966 ntBASIC0.62□□□□□ -2.31
TFF3Q07654 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.61□□□□□ -2.31
TFF3Q07654 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.61□□□□□ -2.31
TFF3Q07654 OR4G2P-201ENST00000328113 903 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 AL158823.1-201ENST00000418441 478 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 RPL27AP8-201ENST00000424277 446 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 CR848007.2-201ENST00000424918 787 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.61□□□□□ -2.31
TFF3Q07654 AC016691.1-201ENST00000441321 413 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 DYNLT3P2-201ENST00000442517 295 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 TPTE2P6-202ENST00000445572 1007 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.61□□□□□ -2.31
TFF3Q07654 AP004371.1-201ENST00000525240 214 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.61□□□□□ -2.31
TFF3Q07654 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.61□□□□□ -2.31
TFF3Q07654 MIR3198-2-201ENST00000577868 80 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 MIR4711-201ENST00000578274 70 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.61□□□□□ -2.31
TFF3Q07654 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 AC007038.2-201ENST00000608095 740 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 AL773524.1-201ENST00000614065 229 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 AC145207.9-201ENST00000623802 325 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 AC087821.2-201ENST00000637086 450 ntBASIC0.61□□□□□ -2.31
TFF3Q07654 MIR515-2-201ENST00000384883 83 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 MIR515-1-201ENST00000384884 83 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 RNU1-78P-201ENST00000391248 165 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 AC096920.1-201ENST00000423991 241 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.6□□□□□ -2.31
TFF3Q07654 AC092393.1-201ENST00000439625 742 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 JTBP1-201ENST00000441314 247 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 RPL31P60-201ENST00000478450 367 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 RPL30P5-201ENST00000494923 336 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 KATNBL1P4-201ENST00000503545 918 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.6□□□□□ -2.31
TFF3Q07654 AC067942.3-201ENST00000512025 362 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.6□□□□□ -2.31
TFF3Q07654 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.6□□□□□ -2.31
TFF3Q07654 AC087272.1-201ENST00000523624 533 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.6□□□□□ -2.31
TFF3Q07654 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.6□□□□□ -2.31
TFF3Q07654 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.6□□□□□ -2.31
TFF3Q07654 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.6□□□□□ -2.31
TFF3Q07654 FAM106CP-201ENST00000582212 507 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.6□□□□□ -2.31
TFF3Q07654 AC243960.4-201ENST00000600532 288 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.6□□□□□ -2.31
TFF3Q07654 AC008163.1-202ENST00000636004 2889 ntBASIC0.6□□□□□ -2.31
TFF3Q07654 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TFF3Q07654 RNU6-942P-201ENST00000363002 107 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 SNORD114-23-201ENST00000363536 72 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 Y_RNA.374-201ENST00000365606 101 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 MIR618-201ENST00000385287 98 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 POLR2J4-204ENST00000418424 324 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.59□□□□□ -2.31
TFF3Q07654 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.59□□□□□ -2.31
TFF3Q07654 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.59□□□□□ -2.31
TFF3Q07654 RPS20P20-201ENST00000460498 340 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.59□□□□□ -2.31
TFF3Q07654 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.59□□□□□ -2.31
TFF3Q07654 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.59□□□□□ -2.31
TFF3Q07654 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.59□□□□□ -2.31
TFF3Q07654 AC005498.1-201ENST00000592125 465 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms