Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LMO4P61968 Y_RNA.460-201ENST00000384255 102 ntBASIC2.75□□□□□ -1.97
LMO4P61968 MIR128-1-201ENST00000384921 82 ntBASIC2.75□□□□□ -1.97
LMO4P61968 RNU6-882P-201ENST00000391025 103 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AL591416.1-201ENST00000404015 867 ntBASIC2.75□□□□□ -1.97
LMO4P61968 RNU6-373P-201ENST00000411247 98 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC063979.1-201ENST00000415539 377 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.75□□□□□ -1.97
LMO4P61968 MTCO1P39-201ENST00000426148 480 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.75□□□□□ -1.97
LMO4P61968 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 CBWD4P-201ENST00000445695 655 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC008264.1-201ENST00000447612 367 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC234775.1-201ENST00000454247 670 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC104308.1-201ENST00000454621 333 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.75□□□□□ -1.97
LMO4P61968 RPL23AP41-201ENST00000484754 458 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 HMGN1P13-201ENST00000505795 138 ntBASIC2.75□□□□□ -1.97
LMO4P61968 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.75□□□□□ -1.97
LMO4P61968 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.75□□□□□ -1.97
LMO4P61968 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.75□□□□□ -1.97
LMO4P61968 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 AC243972.3-201ENST00000539655 198 ntBASIC2.75□□□□□ -1.97
LMO4P61968 HIGD1AP1-201ENST00000550979 275 ntBASIC2.75□□□□□ -1.97
LMO4P61968 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 OR4T1P-201ENST00000554933 911 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO4P61968 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.75□□□□□ -1.97
LMO4P61968 AC005498.1-201ENST00000592125 465 ntBASIC2.75□□□□□ -1.97
LMO4P61968 VN1R80P-201ENST00000597126 338 ntBASIC2.75□□□□□ -1.97
LMO4P61968 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.75□□□□□ -1.97
LMO4P61968 AC090574.1-201ENST00000623186 233 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.75□□□□□ -1.97
LMO4P61968 AC244205.2-202ENST00000635781 342 ntBASIC2.75□□□□□ -1.97
LMO4P61968 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.75□□□□□ -1.97
LMO4P61968 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
LMO4P61968 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LMO4P61968 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LMO4P61968 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMO4P61968 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMO4P61968 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO4P61968 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LMO4P61968 RNU6-97P-201ENST00000363387 104 ntBASIC2.74□□□□□ -1.97
LMO4P61968 Y_RNA.394-201ENST00000383942 103 ntBASIC2.74□□□□□ -1.97
LMO4P61968 RNU6-74P-201ENST00000384235 107 ntBASIC2.74□□□□□ -1.97
LMO4P61968 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LMO4P61968 U3.20-201ENST00000390909 217 ntBASIC2.74□□□□□ -1.97
LMO4P61968 SNORA48.5-201ENST00000391143 135 ntBASIC2.74□□□□□ -1.97
LMO4P61968 RNU6-332P-201ENST00000391193 108 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AL162578.1-201ENST00000406202 378 ntBASIC2.74□□□□□ -1.97
LMO4P61968 RNU2-43P-201ENST00000410306 190 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.74□□□□□ -1.97
LMO4P61968 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 AL354751.2-201ENST00000415471 210 ntBASIC2.74□□□□□ -1.97
LMO4P61968 YPEL5P1-201ENST00000419731 367 ntBASIC2.74□□□□□ -1.97
LMO4P61968 FTH1P1-201ENST00000437933 532 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC108734.1-201ENST00000439549 399 ntBASIC2.74□□□□□ -1.97
LMO4P61968 RAC1P7-201ENST00000445367 377 ntBASIC2.74□□□□□ -1.97
LMO4P61968 MRPL50P4-201ENST00000446432 475 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC140076.1-201ENST00000449897 361 ntBASIC2.74□□□□□ -1.97
LMO4P61968 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO4P61968 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 RNU7-63P-201ENST00000459054 62 ntBASIC2.74□□□□□ -1.97
LMO4P61968 RPL23AP67-201ENST00000465341 474 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC021382.1-201ENST00000483523 359 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO4P61968 NIPA2P2-201ENST00000496376 1083 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 RNU6-410P-201ENST00000517006 107 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO4P61968 AC105029.1-201ENST00000520250 669 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC103783.1-201ENST00000520506 373 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AP001804.3-201ENST00000525146 880 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AP003497.1-201ENST00000528472 562 ntBASIC2.74□□□□□ -1.97
LMO4P61968 OR4R1P-201ENST00000529879 463 ntBASIC2.74□□□□□ -1.97
LMO4P61968 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO4P61968 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 AC060771.1-201ENST00000582031 164 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC098848.2-201ENST00000588023 330 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms