Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 U2.2-201ENST00000616535 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.3-201ENST00000617785 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.19-201ENST00000618602 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 RNU2-1-201ENST00000618664 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.6-201ENST00000619225 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.5-201ENST00000619465 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.10-201ENST00000620268 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 AP003476.1-201ENST00000623984 516 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 AC007490.1-201ENST00000624321 703 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 AC010149.2-201ENST00000637608 315 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CKS1BP61024 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CKS1BP61024 Z98749.2-208ENST00000381646 500 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 MIR561-201ENST00000385216 97 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 RNA5SP465-201ENST00000391195 109 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 UBE2V1P2-201ENST00000397758 440 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 RNU6-1140P-201ENST00000410517 106 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 BTF3P8-201ENST00000414577 526 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.12□□□□□ -2.23
CKS1BP61024 PPP1R11P2-201ENST00000423543 382 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.12□□□□□ -2.23
CKS1BP61024 AL161788.1-201ENST00000441805 169 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.12□□□□□ -2.23
CKS1BP61024 SNORD121B-201ENST00000458838 81 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 RPL32P14-201ENST00000463196 378 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 RPL31P58-201ENST00000469001 379 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 RPL22P13-201ENST00000493291 347 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.12□□□□□ -2.23
CKS1BP61024 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.12□□□□□ -2.23
CKS1BP61024 SNORA48.11-201ENST00000517015 89 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.12□□□□□ -2.23
CKS1BP61024 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
CKS1BP61024 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
CKS1BP61024 AC006199.1-201ENST00000548728 219 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.12□□□□□ -2.23
CKS1BP61024 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.12□□□□□ -2.23
CKS1BP61024 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.12□□□□□ -2.23
CKS1BP61024 AC124283.4-201ENST00000581815 456 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AL020997.3-201ENST00000602843 359 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 DUXAP11-201ENST00000603858 526 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 MIR502-201ENST00000606349 86 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.12□□□□□ -2.23
CKS1BP61024 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.12□□□□□ -2.23
CKS1BP61024 CDC27P3-201ENST00000635418 1910 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CKS1BP61024 AC092881.1-201ENST00000638218 2733 ntBASIC1.12□□□□□ -2.23
CKS1BP61024 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 Y_RNA.510-201ENST00000384511 114 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 RSL24D1P4-201ENST00000400938 484 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 MIR1294-201ENST00000408503 142 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 USP9YP19-201ENST00000412165 485 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 USP9YP13-201ENST00000417797 480 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.11□□□□□ -2.23
CKS1BP61024 UBE2V1P4-201ENST00000425374 344 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 AC005345.1-201ENST00000431868 217 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.11□□□□□ -2.23
CKS1BP61024 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.11□□□□□ -2.23
CKS1BP61024 NDUFA5P7-201ENST00000452914 242 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 RNA5SP57-201ENST00000459463 123 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 AC104564.1-201ENST00000493028 407 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 ANXA2P1-201ENST00000505539 926 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
CKS1BP61024 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.11□□□□□ -2.23
CKS1BP61024 SMURF2P1-201ENST00000514992 481 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 NDUFA5P6-201ENST00000542110 379 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 AL512310.1-201ENST00000548639 172 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 AC008127.2-201ENST00000549925 1075 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.11□□□□□ -2.23
CKS1BP61024 AC110588.1-201ENST00000559699 137 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.11□□□□□ -2.23
CKS1BP61024 MIR4422-201ENST00000581938 83 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 RPAP2P1-201ENST00000603626 1168 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 BX322635.1-201ENST00000605804 496 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 AC093673.2-201ENST00000609674 331 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.11□□□□□ -2.23
CKS1BP61024 AC107905.1-201ENST00000616204 426 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 MIR4275-201ENST00000636486 87 ntBASIC1.11□□□□□ -2.23
CKS1BP61024 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
CKS1BP61024 U8.2-201ENST00000363156 134 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 SNORA40.18-201ENST00000391200 128 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 SNORA3.2-201ENST00000408221 125 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CKS1BP61024 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.1□□□□□ -2.23
CKS1BP61024 AC008850.1-201ENST00000427546 362 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 HMGB1P18-201ENST00000438801 619 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 AC003989.2-201ENST00000440224 169 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.1□□□□□ -2.23
CKS1BP61024 AL137159.1-201ENST00000452808 512 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 AC008379.1-201ENST00000463655 464 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 RPS29P11-201ENST00000496507 171 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 AC092436.1-201ENST00000506450 503 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.1□□□□□ -2.23
CKS1BP61024 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.1□□□□□ -2.23
CKS1BP61024 RNU6-416P-201ENST00000516265 103 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 Y_RNA.675-201ENST00000516389 149 ntBASIC1.1□□□□□ -2.23
CKS1BP61024 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.1□□□□□ -2.23
CKS1BP61024 AC084851.1-201ENST00000529105 249 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms