Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.75□□□□□ -2.13
ACTBP60709 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.75□□□□□ -2.13
ACTBP60709 SNRPGP18-201ENST00000553000 214 ntBASIC1.75□□□□□ -2.13
ACTBP60709 MIR4765-201ENST00000585007 77 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AP001269.3-201ENST00000588718 329 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AL445435.1-201ENST00000604232 665 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AC069545.1-201ENST00000605671 358 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AC116312.1-201ENST00000606841 314 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AL138478.1-201ENST00000612252 832 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RN7SL853P-201ENST00000617250 223 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AC064859.1-201ENST00000624741 174 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AC006927.2-201ENST00000639256 389 ntBASIC1.75□□□□□ -2.13
ACTBP60709 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
ACTBP60709 AP005901.5-201ENST00000545779 1796 ntBASIC1.75□□□□□ -2.13
ACTBP60709 ZNF702P-202ENST00000434269 1966 ntBASIC1.74□□□□□ -2.13
ACTBP60709 SNORA23-201ENST00000365128 182 ntBASIC1.74□□□□□ -2.13
ACTBP60709 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ACTBP60709 RNU6-637P-201ENST00000384050 107 ntBASIC1.74□□□□□ -2.13
ACTBP60709 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ACTBP60709 RPL23AP29-201ENST00000397284 453 ntBASIC1.74□□□□□ -2.13
ACTBP60709 CCNG1P1-201ENST00000406783 885 ntBASIC1.74□□□□□ -2.13
ACTBP60709 NDUFS5P4-201ENST00000412983 318 ntBASIC1.74□□□□□ -2.13
ACTBP60709 BTF3P8-201ENST00000414577 526 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.74□□□□□ -2.13
ACTBP60709 RPL31P63-201ENST00000422565 375 ntBASIC1.74□□□□□ -2.13
ACTBP60709 C1DP1-201ENST00000426049 402 ntBASIC1.74□□□□□ -2.13
ACTBP60709 RPL30P4-201ENST00000429309 333 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC007919.1-201ENST00000429380 217 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.74□□□□□ -2.13
ACTBP60709 PTGES3P1-201ENST00000439531 483 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.74□□□□□ -2.13
ACTBP60709 MTCYBP42-201ENST00000444653 1130 ntBASIC1.74□□□□□ -2.13
ACTBP60709 RPL23AP6-201ENST00000446637 472 ntBASIC1.74□□□□□ -2.13
ACTBP60709 RPL23AP3-201ENST00000453844 468 ntBASIC1.74□□□□□ -2.13
ACTBP60709 snoU13.8-201ENST00000458890 104 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.74□□□□□ -2.13
ACTBP60709 HMGB1P28-201ENST00000507778 552 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC008837.1-201ENST00000511513 412 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.74□□□□□ -2.13
ACTBP60709 SNORA31.6-201ENST00000516241 130 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AL512310.1-201ENST00000548639 172 ntBASIC1.74□□□□□ -2.13
ACTBP60709 CYB5AP5-201ENST00000549779 389 ntBASIC1.74□□□□□ -2.13
ACTBP60709 MIR4299-201ENST00000577899 72 ntBASIC1.74□□□□□ -2.13
ACTBP60709 MIR5708-201ENST00000579723 85 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AL353997.4-201ENST00000586196 166 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC243960.4-201ENST00000600532 288 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AL355297.2-201ENST00000604792 129 ntBASIC1.74□□□□□ -2.13
ACTBP60709 uc_338.14-201ENST00000613162 166 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC008759.3-201ENST00000613300 508 ntBASIC1.74□□□□□ -2.13
ACTBP60709 AC109809.1-201ENST00000619665 545 ntBASIC1.74□□□□□ -2.13
ACTBP60709 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
ACTBP60709 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.74□□□□□ -2.13
ACTBP60709 AL138713.1-201ENST00000624026 2130 ntBASIC1.74□□□□□ -2.13
ACTBP60709 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.74□□□□□ -2.13
ACTBP60709 AC091948.2-201ENST00000636510 279 ntBASIC1.74□□□□□ -2.13
ACTBP60709 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
ACTBP60709 MTND5P6-201ENST00000422338 1798 ntBASIC1.74□□□□□ -2.13
ACTBP60709 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ACTBP60709 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.73□□□□□ -2.13
ACTBP60709 U8.2-201ENST00000363156 134 ntBASIC1.73□□□□□ -2.13
ACTBP60709 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.73□□□□□ -2.13
ACTBP60709 RNU1-39P-201ENST00000383897 165 ntBASIC1.73□□□□□ -2.13
ACTBP60709 MTCO1P56-201ENST00000401674 224 ntBASIC1.73□□□□□ -2.13
ACTBP60709 RPL7P27-201ENST00000403775 720 ntBASIC1.73□□□□□ -2.13
ACTBP60709 SNORA11.4-201ENST00000408823 129 ntBASIC1.73□□□□□ -2.13
ACTBP60709 RNU2-42P-201ENST00000410697 113 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC068533.2-201ENST00000411872 306 ntBASIC1.73□□□□□ -2.13
ACTBP60709 EDDM3CP-201ENST00000415977 425 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.73□□□□□ -2.13
ACTBP60709 AL356320.1-201ENST00000429616 163 ntBASIC1.73□□□□□ -2.13
ACTBP60709 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.73□□□□□ -2.13
ACTBP60709 USP9YP22-201ENST00000438971 294 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC017099.1-201ENST00000448261 1028 ntBASIC1.73□□□□□ -2.13
ACTBP60709 MTND1P9-201ENST00000453775 944 ntBASIC1.73□□□□□ -2.13
ACTBP60709 RNU7-136P-201ENST00000458819 69 ntBASIC1.73□□□□□ -2.13
ACTBP60709 RPL23AP41-201ENST00000484754 458 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC092902.1-201ENST00000486999 259 ntBASIC1.73□□□□□ -2.13
ACTBP60709 HMGB1P36-201ENST00000487709 576 ntBASIC1.73□□□□□ -2.13
ACTBP60709 RPS27AP10-201ENST00000496103 208 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC096571.1-202ENST00000506634 735 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.73□□□□□ -2.13
ACTBP60709 RNA5SP112-201ENST00000515937 99 ntBASIC1.73□□□□□ -2.13
ACTBP60709 RNA5SP137-201ENST00000516833 135 ntBASIC1.73□□□□□ -2.13
ACTBP60709 SNORD19.2-201ENST00000516978 73 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.73□□□□□ -2.13
ACTBP60709 OR5AL2P-201ENST00000532185 920 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.73□□□□□ -2.13
ACTBP60709 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.73□□□□□ -2.13
ACTBP60709 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.73□□□□□ -2.13
ACTBP60709 AC087897.1-201ENST00000550134 156 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC026464.5-201ENST00000562497 722 ntBASIC1.73□□□□□ -2.13
ACTBP60709 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.73□□□□□ -2.13
ACTBP60709 AC024257.5-201ENST00000612739 531 ntBASIC1.73□□□□□ -2.13
ACTBP60709 MIR3199-2-201ENST00000636243 86 ntBASIC1.73□□□□□ -2.13
ACTBP60709 U2.21-201ENST00000637295 81 ntBASIC1.73□□□□□ -2.13
ACTBP60709 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ACTBP60709 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
ACTBP60709 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ACTBP60709 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ACTBP60709 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms