Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
HIST1H2BDP58876 AC007375.1-201ENST00000554513 578 ntBASIC1.31□□□□□ -2.2
HIST1H2BDP58876 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.31□□□□□ -2.2
HIST1H2BDP58876 AC073544.2-201ENST00000601155 540 ntBASIC1.31□□□□□ -2.2
HIST1H2BDP58876 AC007938.3-201ENST00000604965 623 ntBASIC1.31□□□□□ -2.2
HIST1H2BDP58876 AC009237.15-201ENST00000610252 501 ntBASIC1.31□□□□□ -2.2
HIST1H2BDP58876 AC068944.2-201ENST00000610373 403 ntBASIC1.31□□□□□ -2.2
HIST1H2BDP58876 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HIST1H2BDP58876 AC104454.1-201ENST00000421341 1401 ntBASIC1.31□□□□□ -2.2
HIST1H2BDP58876 AL161781.1-201ENST00000354277 403 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 SNORA25B-201ENST00000365507 128 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 RNU6-468P-201ENST00000384003 109 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL079342.2-201ENST00000403367 482 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL139397.2-201ENST00000404529 772 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 MTND3P20-201ENST00000407663 186 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC019097.1-201ENST00000424783 735 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 MTND4P6-201ENST00000438297 472 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 USP9YP15-201ENST00000442391 422 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 MTATP6P30-201ENST00000443540 664 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC020550.1-201ENST00000447385 163 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC079203.1-201ENST00000487972 404 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 RPS15AP36-201ENST00000492022 382 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC018437.1-201ENST00000492214 406 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 COX6CP8-201ENST00000522620 226 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 OR6C7P-201ENST00000547875 934 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 MRPS36P5-201ENST00000551909 298 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC104581.2-201ENST00000572227 430 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC012213.3-201ENST00000577199 777 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL390838.2-201ENST00000602394 274 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL355598.1-201ENST00000604169 202 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL161798.1-201ENST00000604630 131 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC012467.1-201ENST00000607740 256 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 Z99571.1-201ENST00000636677 394 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 AC099063.3-201ENST00000642066 185 ntBASIC1.3□□□□□ -2.2
HIST1H2BDP58876 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
HIST1H2BDP58876 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 RNU6-223P-201ENST00000362830 107 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 RNU6-609P-201ENST00000365459 107 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 RNU6-432P-201ENST00000384196 109 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 RNU6-1122P-201ENST00000384449 107 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 SNORA8-201ENST00000384574 139 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 OR9R1P-201ENST00000412200 877 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC092017.2-201ENST00000427600 362 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC004975.1-201ENST00000428733 208 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 RSU1P2-202ENST00000437884 485 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 MTCO3P45-201ENST00000443036 613 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC117503.1-201ENST00000472241 394 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC018868.1-201ENST00000491307 315 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 RNU6-581P-201ENST00000516214 105 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 RPL7P20-201ENST00000520308 745 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 RANP3-201ENST00000530970 276 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 MIR5708-201ENST00000579723 85 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC007448.1-201ENST00000582714 234 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 BBIP1P1-201ENST00000602999 279 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC098826.3-201ENST00000603823 466 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC078880.5-201ENST00000617845 421 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC093875.1-201ENST00000623688 504 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AL118508.4-201ENST00000624142 1176 ntBASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.29□□□□□ -2.2
HIST1H2BDP58876 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.28□□□□□ -2.2
HIST1H2BDP58876 NACAP2-201ENST00000318548 624 ntBASIC1.28□□□□□ -2.2
HIST1H2BDP58876 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
HIST1H2BDP58876 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.28□□□□□ -2.2
HIST1H2BDP58876 MIR561-201ENST00000385216 97 ntBASIC1.28□□□□□ -2.2
HIST1H2BDP58876 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.28□□□□□ -2.2
HIST1H2BDP58876 RPL7P34-201ENST00000433316 712 ntBASIC1.28□□□□□ -2.2
HIST1H2BDP58876 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.28□□□□□ -2.2
HIST1H2BDP58876 AL357134.1-201ENST00000445848 426 ntBASIC1.28□□□□□ -2.2
HIST1H2BDP58876 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.28□□□□□ -2.2
HIST1H2BDP58876 AC092001.1-201ENST00000453012 261 ntBASIC1.28□□□□□ -2.2
HIST1H2BDP58876 AC016724.1-201ENST00000453215 421 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms