Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.72□□□□□ -1.81
CLRN1P58418 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN1P58418 AL157871.3-201ENST00000557231 293 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.72□□□□□ -1.81
CLRN1P58418 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.72□□□□□ -1.81
CLRN1P58418 AC068790.4-201ENST00000602474 263 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 AC018462.2-201ENST00000605375 395 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN1P58418 AP002826.1-201ENST00000608835 315 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN1P58418 SNORD39.4-201ENST00000620099 78 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
CLRN1P58418 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN1P58418 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.71□□□□□ -1.81
CLRN1P58418 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CLRN1P58418 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CLRN1P58418 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.71□□□□□ -1.81
CLRN1P58418 Y_RNA.28-201ENST00000362554 111 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 RNU1-132P-201ENST00000364300 164 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLRN1P58418 Y_RNA.404-201ENST00000383978 102 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 RNU6-890P-201ENST00000384121 107 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLRN1P58418 RNU2-3P-201ENST00000410144 191 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN1P58418 AL353621.1-201ENST00000418219 243 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 NDUFB4P7-201ENST00000423198 363 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AC236972.1-201ENST00000433225 199 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.71□□□□□ -1.82
CLRN1P58418 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN1P58418 AC006463.2-201ENST00000473326 348 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 RN7SL691P-201ENST00000494487 301 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN1P58418 VWA8P1-201ENST00000510889 176 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.71□□□□□ -1.82
CLRN1P58418 RNA5SP154-201ENST00000516193 111 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN1P58418 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.71□□□□□ -1.82
CLRN1P58418 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.71□□□□□ -1.82
CLRN1P58418 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN1P58418 AC004024.1-201ENST00000549244 247 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.71□□□□□ -1.82
CLRN1P58418 ELOCP5-201ENST00000604924 333 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AC064801.1-201ENST00000612025 407 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AC005344.1-201ENST00000613391 459 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AL161423.1-201ENST00000613700 262 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AC090132.2-201ENST00000615881 347 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 SNX18P1Y-201ENST00000616231 511 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 AC092608.2-201ENST00000624427 218 ntBASIC3.71□□□□□ -1.82
CLRN1P58418 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN1P58418 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.71□□□□□ -1.82
CLRN1P58418 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLRN1P58418 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLRN1P58418 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.71□□□□□ -1.82
CLRN1P58418 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CLRN1P58418 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.7□□□□□ -1.82
CLRN1P58418 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN1P58418 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN1P58418 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.7□□□□□ -1.82
CLRN1P58418 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN1P58418 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN1P58418 MIR383-201ENST00000362257 73 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 Y_RNA.112-201ENST00000363250 102 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 SNORA7.2-201ENST00000364446 145 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 RNA5SP366-201ENST00000365454 123 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLRN1P58418 RNU6-1040P-201ENST00000383974 107 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 RNU6-639P-201ENST00000384074 107 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 MIR513A2-201ENST00000385249 127 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 SNORD73A-201ENST00000386062 65 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 RPL23AP26-201ENST00000412728 464 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.7□□□□□ -1.82
CLRN1P58418 UBE2V1P4-201ENST00000425374 344 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AC007919.1-201ENST00000429380 217 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 COX6B1P7-201ENST00000430845 235 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.7□□□□□ -1.82
CLRN1P58418 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.7□□□□□ -1.82
CLRN1P58418 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.7□□□□□ -1.82
CLRN1P58418 AC109327.1-201ENST00000471666 403 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.7□□□□□ -1.82
CLRN1P58418 AC078817.1-201ENST00000492623 435 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.7□□□□□ -1.82
CLRN1P58418 RNU1-86P-201ENST00000516108 154 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 SNORA70.16-201ENST00000516390 95 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 RNU1-107P-201ENST00000516617 154 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 RNU6-988P-201ENST00000519081 107 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AC104576.1-201ENST00000524225 88 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.7□□□□□ -1.82
CLRN1P58418 AC022655.2-201ENST00000577280 318 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN1P58418 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.7□□□□□ -1.82
CLRN1P58418 AC008737.2-201ENST00000599446 118 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AC008745.1-201ENST00000604064 271 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN1P58418 AC114781.5-201ENST00000615297 108 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AC011944.2-201ENST00000624440 683 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 AC008785.1-201ENST00000624475 456 ntBASIC3.7□□□□□ -1.82
CLRN1P58418 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms