Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC244035.1-201ENST00000430042 390 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN18P56856 MICF-203ENST00000432679 129 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 RPL36AP53-201ENST00000432891 316 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 UBE2D3P1-201ENST00000436669 444 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AC018634.1-201ENST00000437554 401 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AL161651.1-201ENST00000440882 223 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AC020550.1-201ENST00000447385 163 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN18P56856 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN18P56856 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN18P56856 AC034222.1-201ENST00000494052 532 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 LTV1P1-201ENST00000510683 1237 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AC023538.1-201ENST00000534576 736 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AC021739.1-201ENST00000559631 174 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AC105137.2-201ENST00000569073 466 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN18P56856 AL606834.3-201ENST00000602615 496 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AL355598.1-201ENST00000604169 202 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.07□□□□□ -2.08
CLDN18P56856 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.07□□□□□ -2.08
CLDN18P56856 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.07□□□□□ -2.08
CLDN18P56856 AL121652.1-201ENST00000608851 448 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 MIR6840-201ENST00000611937 71 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AL161423.1-201ENST00000613700 262 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN18P56856 AC007490.1-201ENST00000624321 703 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 PISRT1-201ENST00000626175 531 ntBASIC2.07□□□□□ -2.08
CLDN18P56856 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN18P56856 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN18P56856 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CLDN18P56856 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLDN18P56856 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN18P56856 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN18P56856 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN18P56856 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.06□□□□□ -2.08
CLDN18P56856 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN18P56856 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN18P56856 AC004944.1-201ENST00000517807 3059 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
CLDN18P56856 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN18P56856 Y_RNA.472-201ENST00000384322 102 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLDN18P56856 MTCO1P17-201ENST00000411522 491 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AF274854.1-201ENST00000413236 615 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 USP9YP27-201ENST00000418455 438 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN18P56856 USP9YP11-201ENST00000427537 717 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 RPL30P4-201ENST00000429309 333 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 ATP5F1P1-201ENST00000433775 569 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 PGBD4P3-201ENST00000440731 581 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.06□□□□□ -2.08
CLDN18P56856 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN18P56856 EEF1E1P1-201ENST00000446998 430 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 ZNF886P-201ENST00000450781 723 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN18P56856 KLF3P2-201ENST00000465138 268 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 RPL23AP49-201ENST00000492925 468 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 ANXA2P1-201ENST00000505539 926 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN18P56856 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN18P56856 RNU1-41P-201ENST00000516161 162 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 RNU1-48P-201ENST00000516400 162 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AP003467.2-201ENST00000520175 319 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.06□□□□□ -2.08
CLDN18P56856 MRPS36P5-201ENST00000551909 298 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN18P56856 AL121821.2-201ENST00000556081 394 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.06□□□□□ -2.08
CLDN18P56856 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN18P56856 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN18P56856 AC105245.1-201ENST00000581934 244 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AC004908.2-201ENST00000609090 574 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN18P56856 AC245297.2-201ENST00000610119 565 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN18P56856 AC011939.3-201ENST00000613686 466 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 U2.21-201ENST00000637295 81 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 AC013437.2-201ENST00000639587 677 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN18P56856 DDX43P2-201ENST00000604753 1354 ntBASIC2.06□□□□□ -2.08
CLDN18P56856 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLDN18P56856 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
CLDN18P56856 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CLDN18P56856 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CLDN18P56856 SNORA70B-201ENST00000384210 135 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 RNU6-19P-201ENST00000384718 107 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AL591416.1-201ENST00000404015 867 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 SNORD23.1-201ENST00000408212 104 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 RNA5SP270-201ENST00000411361 118 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.05□□□□□ -2.08
CLDN18P56856 MTND1P23-201ENST00000416931 372 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 USP9YP26-201ENST00000421008 661 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN18P56856 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms