Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.81□□□□□ -2.12
CMC4P56277 Z80107.1-201ENST00000436830 412 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC1.81□□□□□ -2.12
CMC4P56277 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.81□□□□□ -2.12
CMC4P56277 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.81□□□□□ -2.12
CMC4P56277 RPL7P36-201ENST00000444633 681 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.81□□□□□ -2.12
CMC4P56277 MTATP6P7-201ENST00000453315 681 ntBASIC1.81□□□□□ -2.12
CMC4P56277 CECR9-201ENST00000453421 199 ntBASIC1.81□□□□□ -2.12
CMC4P56277 ANKRD26P4-201ENST00000455755 950 ntBASIC1.81□□□□□ -2.12
CMC4P56277 SNORD11.1-201ENST00000459482 85 ntBASIC1.81□□□□□ -2.12
CMC4P56277 TRBV1-201ENST00000476502 284 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AC126389.1-201ENST00000477436 290 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AC104685.1-201ENST00000502445 371 ntBASIC1.81□□□□□ -2.12
CMC4P56277 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CMC4P56277 TBCAP3-201ENST00000512475 312 ntBASIC1.81□□□□□ -2.12
CMC4P56277 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CMC4P56277 SCARNA17.1-201ENST00000516211 143 ntBASIC1.81□□□□□ -2.12
CMC4P56277 SCARNA17.2-201ENST00000516334 143 ntBASIC1.81□□□□□ -2.12
CMC4P56277 SNORD19.2-201ENST00000516978 73 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AC004486.1-201ENST00000546846 233 ntBASIC1.81□□□□□ -2.12
CMC4P56277 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.81□□□□□ -2.12
CMC4P56277 MIR3908-201ENST00000579798 126 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.81□□□□□ -2.12
CMC4P56277 MIR4435-1-201ENST00000582552 80 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.81□□□□□ -2.12
CMC4P56277 MIR3117-201ENST00000584034 78 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AL356575.1-201ENST00000603008 283 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AP000403.1-201ENST00000603349 851 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AL356280.1-201ENST00000603614 379 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AL627309.6-201ENST00000606857 840 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AL355472.4-201ENST00000610233 626 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.81□□□□□ -2.12
CMC4P56277 SCARNA17.4-201ENST00000614296 143 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.81□□□□□ -2.12
CMC4P56277 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CMC4P56277 AC010889.1-201ENST00000566193 2666 ntBASIC1.81□□□□□ -2.12
CMC4P56277 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.8□□□□□ -2.12
CMC4P56277 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CMC4P56277 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CMC4P56277 DEFA7P-201ENST00000382676 285 ntBASIC1.8□□□□□ -2.12
CMC4P56277 RNU6-1083P-201ENST00000384022 107 ntBASIC1.8□□□□□ -2.12
CMC4P56277 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CMC4P56277 RNU6-278P-201ENST00000390945 109 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AL445529.1-201ENST00000398713 389 ntBASIC1.8□□□□□ -2.12
CMC4P56277 RSL24D1P4-201ENST00000400938 484 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AL021407.1-201ENST00000404531 386 ntBASIC1.8□□□□□ -2.12
CMC4P56277 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CMC4P56277 RNU2-49P-201ENST00000410666 184 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.8□□□□□ -2.12
CMC4P56277 AL096701.2-201ENST00000416920 238 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.8□□□□□ -2.12
CMC4P56277 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.8□□□□□ -2.12
CMC4P56277 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CMC4P56277 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.8□□□□□ -2.12
CMC4P56277 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 COX6CP12-201ENST00000446748 202 ntBASIC1.8□□□□□ -2.12
CMC4P56277 DPPA3P1-201ENST00000448050 469 ntBASIC1.8□□□□□ -2.12
CMC4P56277 EEF1B2P7-201ENST00000451177 676 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AC108938.1-201ENST00000451204 136 ntBASIC1.8□□□□□ -2.12
CMC4P56277 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.8□□□□□ -2.12
CMC4P56277 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CMC4P56277 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 RPS3P1-201ENST00000456781 192 ntBASIC1.8□□□□□ -2.12
CMC4P56277 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.8□□□□□ -2.12
CMC4P56277 AC034244.1-201ENST00000507687 207 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AC098799.2-201ENST00000509466 868 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AC008716.1-201ENST00000511084 513 ntBASIC1.8□□□□□ -2.12
CMC4P56277 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.8□□□□□ -2.12
CMC4P56277 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.8□□□□□ -2.12
CMC4P56277 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.8□□□□□ -2.12
CMC4P56277 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 AC009063.1-201ENST00000563342 702 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AC007151.1-201ENST00000572774 483 ntBASIC1.8□□□□□ -2.12
CMC4P56277 BNIP3P23-201ENST00000599655 511 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AF131215.7-201ENST00000602443 707 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AC007938.3-201ENST00000604965 623 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AC091965.4-201ENST00000607691 587 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AC092106.3-201ENST00000611308 722 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AL139418.1-201ENST00000613613 177 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AL449363.1-201ENST00000617815 186 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.8□□□□□ -2.12
CMC4P56277 AP002782.1-201ENST00000623107 614 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AL078595.3-201ENST00000623815 1166 ntBASIC1.8□□□□□ -2.12
CMC4P56277 AC103706.2-201ENST00000638080 240 ntBASIC1.8□□□□□ -2.12
CMC4P56277 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CMC4P56277 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CMC4P56277 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CMC4P56277 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
CMC4P56277 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CMC4P56277 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.79□□□□□ -2.12
CMC4P56277 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.79□□□□□ -2.12
CMC4P56277 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.79□□□□□ -2.12
CMC4P56277 AL391994.1-201ENST00000254724 282 ntBASIC1.79□□□□□ -2.12
CMC4P56277 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms