Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ZNF519P3-201ENST00000557158 1032 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC090888.1-201ENST00000561335 1141 ntBASIC2.43□□□□□ -2.02
LIM2P55344 RPL23AP78-201ENST00000599928 470 ntBASIC2.43□□□□□ -2.02
LIM2P55344 WISP1-OT1-201ENST00000602893 642 ntBASIC2.43□□□□□ -2.02
LIM2P55344 U73023.1-201ENST00000603134 700 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AL022161.1-201ENST00000604390 213 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC004832.5-201ENST00000608677 401 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AL359198.2-201ENST00000611836 194 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC025594.3-201ENST00000613068 790 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC104010.1-201ENST00000616889 150 ntBASIC2.43□□□□□ -2.02
LIM2P55344 API5P2-201ENST00000397055 1498 ntBASIC2.43□□□□□ -2.02
LIM2P55344 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LIM2P55344 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LIM2P55344 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
LIM2P55344 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.42□□□□□ -2.02
LIM2P55344 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
LIM2P55344 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
LIM2P55344 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LIM2P55344 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LIM2P55344 RNU6-511P-201ENST00000363496 107 ntBASIC2.42□□□□□ -2.02
LIM2P55344 Y_RNA.245-201ENST00000364493 95 ntBASIC2.42□□□□□ -2.02
LIM2P55344 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.42□□□□□ -2.02
LIM2P55344 RNU6-817P-201ENST00000391083 104 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AL031121.1-201ENST00000406553 254 ntBASIC2.42□□□□□ -2.02
LIM2P55344 HMGN2P30-201ENST00000423237 256 ntBASIC2.42□□□□□ -2.02
LIM2P55344 ELOCP14-201ENST00000428070 331 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.42□□□□□ -2.02
LIM2P55344 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.42□□□□□ -2.02
LIM2P55344 ELOCP7-201ENST00000439968 331 ntBASIC2.42□□□□□ -2.02
LIM2P55344 RPL23AP58-201ENST00000440453 469 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.42□□□□□ -2.02
LIM2P55344 ZNF114P1-201ENST00000453500 292 ntBASIC2.42□□□□□ -2.02
LIM2P55344 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.42□□□□□ -2.02
LIM2P55344 AC133134.1-201ENST00000466800 359 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AC126182.1-201ENST00000478134 357 ntBASIC2.42□□□□□ -2.02
LIM2P55344 RN7SL432P-201ENST00000484057 298 ntBASIC2.42□□□□□ -2.02
LIM2P55344 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.42□□□□□ -2.02
LIM2P55344 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.42□□□□□ -2.02
LIM2P55344 RNU1-103P-201ENST00000516502 125 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.42□□□□□ -2.02
LIM2P55344 AC022878.1-201ENST00000530684 149 ntBASIC2.42□□□□□ -2.02
LIM2P55344 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AL158211.1-201ENST00000566763 763 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AC135628.1-201ENST00000568867 534 ntBASIC2.42□□□□□ -2.02
LIM2P55344 MIR5697-201ENST00000578045 78 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.42□□□□□ -2.02
LIM2P55344 MIR3670-2-201ENST00000582974 65 ntBASIC2.42□□□□□ -2.02
LIM2P55344 MIR3670-1-201ENST00000584160 65 ntBASIC2.42□□□□□ -2.02
LIM2P55344 MIR3670-3-201ENST00000584855 65 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AF131215.7-201ENST00000602443 707 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AL356575.1-201ENST00000603008 283 ntBASIC2.42□□□□□ -2.02
LIM2P55344 RNU6-87P-201ENST00000607561 108 ntBASIC2.42□□□□□ -2.02
LIM2P55344 MIR3670-4-201ENST00000612260 65 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AC009878.1-201ENST00000621819 340 ntBASIC2.42□□□□□ -2.02
LIM2P55344 AF246928.1-201ENST00000623768 87 ntBASIC2.42□□□□□ -2.02
LIM2P55344 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
LIM2P55344 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LIM2P55344 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.42□□□□□ -2.02
LIM2P55344 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LIM2P55344 MTND4P4-201ENST00000439033 1366 ntBASIC2.41□□□□□ -2.02
LIM2P55344 FTLP6-201ENST00000355274 422 ntBASIC2.41□□□□□ -2.02
LIM2P55344 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LIM2P55344 RNU6-1167P-201ENST00000363227 94 ntBASIC2.41□□□□□ -2.02
LIM2P55344 RNU5E-5P-201ENST00000365379 116 ntBASIC2.41□□□□□ -2.02
LIM2P55344 RNY3P13-201ENST00000365542 102 ntBASIC2.41□□□□□ -2.02
LIM2P55344 SNORA26.7-201ENST00000391288 122 ntBASIC2.41□□□□□ -2.02
LIM2P55344 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.41□□□□□ -2.02
LIM2P55344 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.41□□□□□ -2.02
LIM2P55344 HMGB1P9-201ENST00000429856 646 ntBASIC2.41□□□□□ -2.02
LIM2P55344 HMGB1P27-201ENST00000431429 603 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.41□□□□□ -2.02
LIM2P55344 AL590365.1-201ENST00000450788 243 ntBASIC2.41□□□□□ -2.02
LIM2P55344 RBM43P1-201ENST00000476891 1081 ntBASIC2.41□□□□□ -2.02
LIM2P55344 SRIP1-201ENST00000489235 288 ntBASIC2.41□□□□□ -2.02
LIM2P55344 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.41□□□□□ -2.02
LIM2P55344 RPS27P27-201ENST00000498779 255 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.41□□□□□ -2.02
LIM2P55344 AC114786.4-201ENST00000508771 728 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AC114797.1-201ENST00000514003 728 ntBASIC2.41□□□□□ -2.02
LIM2P55344 RNU2-10P-201ENST00000516375 211 ntBASIC2.41□□□□□ -2.02
LIM2P55344 RNA5SP290-201ENST00000517133 127 ntBASIC2.41□□□□□ -2.02
LIM2P55344 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.41□□□□□ -2.02
LIM2P55344 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.41□□□□□ -2.02
LIM2P55344 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.41□□□□□ -2.02
LIM2P55344 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LIM2P55344 AC128657.1-201ENST00000549459 145 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AL359212.1-201ENST00000556608 614 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AL391261.3-201ENST00000557194 520 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.41□□□□□ -2.02
LIM2P55344 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.41□□□□□ -2.02
LIM2P55344 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.41□□□□□ -2.02
LIM2P55344 AC012435.1-202ENST00000568772 240 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AC068135.2-201ENST00000569293 1028 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.41□□□□□ -2.02
LIM2P55344 AP000787.2-201ENST00000604432 568 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AC108747.1-201ENST00000609508 535 ntBASIC2.41□□□□□ -2.02
LIM2P55344 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.41□□□□□ -2.02
LIM2P55344 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.41□□□□□ -2.02
LIM2P55344 AC007998.5-201ENST00000622938 237 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms