Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH4P55283 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH4P55283 AC097655.1-201ENST00000635075 318 ntBASIC2.37□□□□□ -2.03
CDH4P55283 MIR3199-2-201ENST00000636243 86 ntBASIC2.37□□□□□ -2.03
CDH4P55283 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH4P55283 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH4P55283 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH4P55283 MTND5P29-201ENST00000458676 1807 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC110491.1-201ENST00000562191 2010 ntBASIC2.37□□□□□ -2.03
CDH4P55283 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH4P55283 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH4P55283 AL139276.1-201ENST00000311910 1001 ntBASIC2.36□□□□□ -2.03
CDH4P55283 RNU6-1167P-201ENST00000363227 94 ntBASIC2.36□□□□□ -2.03
CDH4P55283 RNA5SP126-201ENST00000365092 109 ntBASIC2.36□□□□□ -2.03
CDH4P55283 RNU1-73P-201ENST00000383971 164 ntBASIC2.36□□□□□ -2.03
CDH4P55283 RNU6-925P-201ENST00000384629 104 ntBASIC2.36□□□□□ -2.03
CDH4P55283 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH4P55283 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH4P55283 MTCO3P30-201ENST00000426425 670 ntBASIC2.36□□□□□ -2.03
CDH4P55283 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH4P55283 AL009048.1-201ENST00000450437 298 ntBASIC2.36□□□□□ -2.03
CDH4P55283 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH4P55283 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH4P55283 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH4P55283 RPL37P6-201ENST00000460682 294 ntBASIC2.36□□□□□ -2.03
CDH4P55283 LTV1P1-201ENST00000510683 1237 ntBASIC2.36□□□□□ -2.03
CDH4P55283 RNA5SP165-201ENST00000517142 115 ntBASIC2.36□□□□□ -2.03
CDH4P55283 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH4P55283 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH4P55283 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.36□□□□□ -2.03
CDH4P55283 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH4P55283 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH4P55283 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH4P55283 BNIP3P39-201ENST00000601077 554 ntBASIC2.36□□□□□ -2.03
CDH4P55283 AL645944.1-201ENST00000603857 493 ntBASIC2.36□□□□□ -2.03
CDH4P55283 AC007038.2-201ENST00000608095 740 ntBASIC2.36□□□□□ -2.03
CDH4P55283 MIR6895-201ENST00000613497 78 ntBASIC2.36□□□□□ -2.03
CDH4P55283 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
CDH4P55283 AC064859.1-201ENST00000624741 174 ntBASIC2.36□□□□□ -2.03
CDH4P55283 AP000776.1-201ENST00000530032 1663 ntBASIC2.36□□□□□ -2.03
CDH4P55283 MTND4P27-201ENST00000450813 1354 ntBASIC2.36□□□□□ -2.03
CDH4P55283 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH4P55283 ZNF29P-201ENST00000225587 168 ntBASIC2.35□□□□□ -2.03
CDH4P55283 SNORA4.1-201ENST00000364263 144 ntBASIC2.35□□□□□ -2.03
CDH4P55283 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH4P55283 RNU6-1083P-201ENST00000384022 107 ntBASIC2.35□□□□□ -2.03
CDH4P55283 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
CDH4P55283 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
CDH4P55283 RNU2-68P-201ENST00000410878 191 ntBASIC2.35□□□□□ -2.03
CDH4P55283 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH4P55283 SEPT2P1-201ENST00000419651 180 ntBASIC2.35□□□□□ -2.03
CDH4P55283 SKA2P1-201ENST00000425592 390 ntBASIC2.35□□□□□ -2.03
CDH4P55283 AC092648.1-201ENST00000425870 423 ntBASIC2.35□□□□□ -2.03
CDH4P55283 HMGB1P9-201ENST00000429856 646 ntBASIC2.35□□□□□ -2.03
CDH4P55283 RSU1P2-202ENST00000437884 485 ntBASIC2.35□□□□□ -2.03
CDH4P55283 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH4P55283 PTENP1-201ENST00000447117 1215 ntBASIC2.35□□□□□ -2.03
CDH4P55283 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDH4P55283 AC233279.1-201ENST00000455300 423 ntBASIC2.35□□□□□ -2.03
CDH4P55283 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH4P55283 RPL23AP49-201ENST00000492925 468 ntBASIC2.35□□□□□ -2.03
CDH4P55283 AC023141.11-201ENST00000508864 202 ntBASIC2.35□□□□□ -2.03
CDH4P55283 HMGB3P3-201ENST00000510526 400 ntBASIC2.35□□□□□ -2.03
CDH4P55283 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH4P55283 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
CDH4P55283 IGLV3-17-201ENST00000519099 244 ntBASIC2.35□□□□□ -2.03
CDH4P55283 BTF3P12-201ENST00000519620 469 ntBASIC2.35□□□□□ -2.03
CDH4P55283 MTCYBP20-201ENST00000524239 1129 ntBASIC2.35□□□□□ -2.03
CDH4P55283 AC023824.2-201ENST00000566185 400 ntBASIC2.35□□□□□ -2.03
CDH4P55283 AC022662.1-201ENST00000580252 331 ntBASIC2.35□□□□□ -2.03
CDH4P55283 MIR5694-201ENST00000581190 76 ntBASIC2.35□□□□□ -2.03
CDH4P55283 AC112220.3-201ENST00000605502 502 ntBASIC2.35□□□□□ -2.03
CDH4P55283 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.35□□□□□ -2.03
CDH4P55283 AC106052.1-201ENST00000608029 497 ntBASIC2.35□□□□□ -2.03
CDH4P55283 MIR6766-201ENST00000622641 72 ntBASIC2.35□□□□□ -2.03
CDH4P55283 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CDH4P55283 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
CDH4P55283 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH4P55283 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CDH4P55283 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDH4P55283 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH4P55283 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH4P55283 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH4P55283 MTND5P33-201ENST00000571250 1450 ntBASIC2.34□□□□□ -2.03
CDH4P55283 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH4P55283 SNORA38-201ENST00000363946 132 ntBASIC2.34□□□□□ -2.03
CDH4P55283 MIR19A-201ENST00000384878 82 ntBASIC2.34□□□□□ -2.03
CDH4P55283 RSL24D1P4-201ENST00000400938 484 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AL591416.1-201ENST00000404015 867 ntBASIC2.34□□□□□ -2.03
CDH4P55283 BTF3P7-201ENST00000407097 488 ntBASIC2.34□□□□□ -2.03
CDH4P55283 RN7SKP266-201ENST00000410232 287 ntBASIC2.34□□□□□ -2.03
CDH4P55283 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
CDH4P55283 MTCO2P8-201ENST00000412213 658 ntBASIC2.34□□□□□ -2.03
CDH4P55283 RPL17P12-201ENST00000413391 526 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH4P55283 TXNL1P1-201ENST00000429528 554 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AL356320.1-201ENST00000429616 163 ntBASIC2.34□□□□□ -2.03
CDH4P55283 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH4P55283 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms