Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 PDCL2P1-201ENST00000419302 352 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.71□□□□□ -1.82
COPB1P53618 ATP5JP1-201ENST00000431631 322 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC004866.2-201ENST00000438285 481 ntBASIC3.71□□□□□ -1.82
COPB1P53618 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COPB1P53618 SNORD105B-201ENST00000458770 79 ntBASIC3.71□□□□□ -1.82
COPB1P53618 SNORD108-201ENST00000459332 71 ntBASIC3.71□□□□□ -1.82
COPB1P53618 RPL23AP62-201ENST00000463396 453 ntBASIC3.71□□□□□ -1.82
COPB1P53618 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.71□□□□□ -1.82
COPB1P53618 AL049830.2-201ENST00000480072 201 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC093278.1-201ENST00000494700 600 ntBASIC3.71□□□□□ -1.82
COPB1P53618 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COPB1P53618 MTND3P22-201ENST00000510932 243 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC026801.2-201ENST00000515352 425 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.71□□□□□ -1.82
COPB1P53618 Vault.1-201ENST00000516474 102 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC023050.3-201ENST00000541142 333 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.71□□□□□ -1.82
COPB1P53618 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.71□□□□□ -1.82
COPB1P53618 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
COPB1P53618 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
COPB1P53618 MIR4424-201ENST00000585257 86 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC009233.1-201ENST00000616477 371 ntBASIC3.71□□□□□ -1.82
COPB1P53618 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC011155.2-201ENST00000623202 216 ntBASIC3.71□□□□□ -1.82
COPB1P53618 FRG1KP-201ENST00000623592 341 ntBASIC3.71□□□□□ -1.82
COPB1P53618 MIR7153-201ENST00000637758 57 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC009093.8-201ENST00000641769 292 ntBASIC3.71□□□□□ -1.82
COPB1P53618 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COPB1P53618 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
COPB1P53618 ZNF285B-201ENST00000561698 1767 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.71□□□□□ -1.82
COPB1P53618 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COPB1P53618 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COPB1P53618 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COPB1P53618 USP8P1-201ENST00000494673 3183 ntBASIC3.7□□□□□ -1.82
COPB1P53618 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.7□□□□□ -1.82
COPB1P53618 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.7□□□□□ -1.82
COPB1P53618 RNU6-552P-201ENST00000362869 119 ntBASIC3.7□□□□□ -1.82
COPB1P53618 Y_RNA.813-201ENST00000364639 102 ntBASIC3.7□□□□□ -1.82
COPB1P53618 SNORA23-201ENST00000365128 182 ntBASIC3.7□□□□□ -1.82
COPB1P53618 SNORD115-7-201ENST00000365306 82 ntBASIC3.7□□□□□ -1.82
COPB1P53618 RNU6-629P-201ENST00000384061 103 ntBASIC3.7□□□□□ -1.82
COPB1P53618 RNU6-1029P-201ENST00000384109 107 ntBASIC3.7□□□□□ -1.82
COPB1P53618 PTMAP5-201ENST00000393073 333 ntBASIC3.7□□□□□ -1.82
COPB1P53618 RPL21P17-201ENST00000397467 475 ntBASIC3.7□□□□□ -1.82
COPB1P53618 RPS15AP6-201ENST00000420703 385 ntBASIC3.7□□□□□ -1.82
COPB1P53618 AC244098.2-201ENST00000422068 99 ntBASIC3.7□□□□□ -1.82
COPB1P53618 AC093106.2-201ENST00000428212 385 ntBASIC3.7□□□□□ -1.82
COPB1P53618 CYCSP4-201ENST00000429682 331 ntBASIC3.7□□□□□ -1.82
COPB1P53618 MTND1P18-201ENST00000448191 573 ntBASIC3.7□□□□□ -1.82
COPB1P53618 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.7□□□□□ -1.82
COPB1P53618 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.7□□□□□ -1.82
COPB1P53618 MTND3P16-201ENST00000452205 344 ntBASIC3.7□□□□□ -1.82
COPB1P53618 HMGN2P26-201ENST00000463169 339 ntBASIC3.7□□□□□ -1.82
COPB1P53618 RN7SL330P-201ENST00000469709 307 ntBASIC3.7□□□□□ -1.82
COPB1P53618 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.7□□□□□ -1.82
COPB1P53618 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COPB1P53618 RN7SKP18-201ENST00000516005 275 ntBASIC3.7□□□□□ -1.82
COPB1P53618 SNORA64.4-201ENST00000516632 81 ntBASIC3.7□□□□□ -1.82
COPB1P53618 SNORA31.22-201ENST00000517204 135 ntBASIC3.7□□□□□ -1.82
COPB1P53618 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.7□□□□□ -1.82
COPB1P53618 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.7□□□□□ -1.82
COPB1P53618 OR5AL2P-201ENST00000532185 920 ntBASIC3.7□□□□□ -1.82
COPB1P53618 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.7□□□□□ -1.82
COPB1P53618 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.7□□□□□ -1.82
COPB1P53618 NCAPGP2-201ENST00000557911 754 ntBASIC3.7□□□□□ -1.82
COPB1P53618 MIR4703-201ENST00000577728 79 ntBASIC3.7□□□□□ -1.82
COPB1P53618 MIR5047-201ENST00000579212 100 ntBASIC3.7□□□□□ -1.82
COPB1P53618 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.7□□□□□ -1.82
COPB1P53618 AC007687.1-201ENST00000602704 304 ntBASIC3.7□□□□□ -1.82
COPB1P53618 AC130324.3-201ENST00000614165 542 ntBASIC3.7□□□□□ -1.82
COPB1P53618 AC100810.6-201ENST00000638068 285 ntBASIC3.7□□□□□ -1.82
COPB1P53618 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COPB1P53618 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COPB1P53618 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COPB1P53618 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.7□□□□□ -1.82
COPB1P53618 TAB3P1-202ENST00000452645 1634 ntBASIC3.7□□□□□ -1.82
COPB1P53618 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COPB1P53618 MTND4P29-201ENST00000503122 1372 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNU6-179P-201ENST00000363350 107 ntBASIC3.69□□□□□ -1.82
COPB1P53618 Y_RNA.142-201ENST00000363491 102 ntBASIC3.69□□□□□ -1.82
COPB1P53618 SNORD56.3-201ENST00000363507 71 ntBASIC3.69□□□□□ -1.82
COPB1P53618 Y_RNA.166-201ENST00000363730 102 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNA5SP167-201ENST00000365461 116 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNU6-38P-201ENST00000384085 107 ntBASIC3.69□□□□□ -1.82
COPB1P53618 SNORA5A-201ENST00000384111 134 ntBASIC3.69□□□□□ -1.82
COPB1P53618 Y_RNA.509-201ENST00000384506 99 ntBASIC3.69□□□□□ -1.82
COPB1P53618 MIR34B-201ENST00000385076 84 ntBASIC3.69□□□□□ -1.82
COPB1P53618 MT-TD-201ENST00000387419 68 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNU6-882P-201ENST00000391025 103 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AC110754.1-201ENST00000399740 601 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AL162578.1-201ENST00000406202 378 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNU2-29P-201ENST00000410423 189 ntBASIC3.69□□□□□ -1.82
COPB1P53618 MTCO3P46-201ENST00000425787 232 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.69□□□□□ -1.82
COPB1P53618 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.69□□□□□ -1.82
COPB1P53618 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
COPB1P53618 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms